RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CCAR2Q8N163 923 aaKnown RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 GIMAP8Q8ND71 665 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 ST13P5Q8NFI4 369 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 GOLGA5Q8TBA6 731 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 GATA6Q92908 595 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 EXOC4Q96A65 974 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 CLDN23Q96B33 292 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 ZBTB10Q96DT7 871 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 ZSCAN31Q96LW9 406 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 INPP4AQ96PE3 977 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 SCNM1Q9BWG6 230 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 LSM14BQ9BX40 385 aaKnown RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 AMNQ9BXJ7 453 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 TMEM121BQ9BXQ6 578 aaPredicted RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 TRIM5Q9C035 493 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 NUP62CLQ9H1M0 184 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 SMARCAD1Q9H4L7 1026 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 VAT1LQ9HCJ6 419 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 RXFP3Q9NSD7 469 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 DDX19AQ9NUU7 478 aaKnown RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 RTEL1Q9NZ71 1219 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 ST3GAL5Q9UNP4 418 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 NOC2LQ9Y3T9 749 aaKnown RBP7.2□□□□□ -1.26
HDAC6-210ENST00000441703 PCDHA2Q9Y5H9 948 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 TTC41PQ6P2S7 1318 aa7.2□□□□□ -1.26
HDAC6-210ENST00000441703 CEP295Q9C0D2 2601 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 SMIM35A0A1B0GVV1 85 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 SPATA31C2B4DYI2 1134 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 ANHXE9PGG2 379 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 GCOM1H8Y6P7 765 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-210ENST00000441703 ZC3H11AO75152 810 aaKnown RBP eCLIP7.19□□□□□ -1.26
HDAC6-210ENST00000441703 SSBP05455 408 aaKnown RBP eCLIP7.19□□□□□ -1.26
HDAC6-210ENST00000441703 IVLP07476 585 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 POLR2MP0CAP2 368 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 SYT1P21579 422 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 CHMLP26374 656 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 HSPA4P34932 840 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 CNR2P34972 360 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 CLCN6P51797 869 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 GSDMDP57764 484 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 SEMA3FQ13275 785 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 CCDC178Q5BJE1 867 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 RNF43Q68DV7 783 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 TMCO3Q6UWJ1 677 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 SYT10Q6XYQ8 523 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 KRBA2Q6ZNG9 492 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 MTSS1LQ765P7 747 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 DDX53Q86TM3 631 aaKnown RBP7.19□□□□□ -1.26
HDAC6-210ENST00000441703 ADAM32Q8TC27 787 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 HELQQ8TDG4 1101 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 SEPT1Q8WYJ6 367 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 SENP7Q9BQF6 1050 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 IER2Q9BTL4 223 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 ARRDC1-AS1Q9H2J1 176 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 AZI2Q9H6S1 392 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 JMJD4Q9H9V9 463 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 STK39Q9UEW8 545 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 LIMCH1Q9UPQ0 1083 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 SMC3Q9UQE7 1217 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 ADAMTS20P59510 1910 aa7.19□□□□□ -1.26
HDAC6-210ENST00000441703 EVPLQ92817 2033 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 AXIN1O15169 862 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 CCP110O43303 1012 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 PPP1R11O60927 126 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-210ENST00000441703 GLUD1P00367 558 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 FGAP02671 866 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 CNPP09543 421 aaKnown RBP7.18□□□□□ -1.26
HDAC6-210ENST00000441703 PARP1P09874 1014 aaKnown RBP7.18□□□□□ -1.26
HDAC6-210ENST00000441703 ZNF806P0C7X5 589 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 MYBP10242 640 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 FAM189BP81408 668 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 MRPS9P82933 396 aaKnown RBP7.18□□□□□ -1.26
HDAC6-210ENST00000441703 ADCY1Q08828 1119 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 C19orf57Q0VDD7 668 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 WTAPQ15007 396 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 PLCB4Q15147 1175 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 CCDC6Q16204 474 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 ZSCAN26Q16670 478 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 SWT1Q5T5J6 900 aaKnown RBP7.18□□□□□ -1.26
HDAC6-210ENST00000441703 DAB2IPQ5VWQ8 1189 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 MFSD6Q6ZSS7 791 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 SRLQ86TD4 932 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 NLRX1Q86UT6 975 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 LURAP1LQ8IV03 231 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 TBC1D10CQ8IV04 446 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 GLIS3Q8NEA6 775 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 PI4K2BQ8TCG2 481 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 OTUD7AQ8TE49 926 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-210ENST00000441703 ESR2Q92731 530 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 MTMR8Q96EF0 704 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 IGSF21Q96ID5 467 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 RHOBTB2Q9BYZ6 727 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 CLSTN2Q9H4D0 955 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 RNF41Q9H4P4 317 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-210ENST00000441703 KAT14Q9H8E8 782 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 MRPL17Q9NRX2 175 aaKnown RBP7.18□□□□□ -1.26
HDAC6-210ENST00000441703 RNF19AQ9NV58 838 aa7.18□□□□□ -1.26
HDAC6-210ENST00000441703 BCCIPQ9P287 314 aaKnown RBP eCLIP7.18□□□□□ -1.26
HDAC6-210ENST00000441703 IMPACTQ9P2X3 320 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms