RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TMEM165Q9HC07 324 aa18.02■□□□□ 0.48
PMS1-213ENST00000441310 NMRK1Q9NWW6 199 aa18.02■□□□□ 0.48
PMS1-213ENST00000441310 NVLO15381 856 aaKnown RBP18.02■□□□□ 0.47
PMS1-213ENST00000441310 SLC37A4O43826 429 aa18.02■□□□□ 0.47
PMS1-213ENST00000441310 EPHB2P29323 1055 aa18.02■□□□□ 0.47
PMS1-213ENST00000441310 ALKBH5Q6P6C2 394 aaKnown RBP18.02■□□□□ 0.47
PMS1-213ENST00000441310 ZDHHC24Q6UX98 284 aa18.02■□□□□ 0.47
PMS1-213ENST00000441310 SH3BP5LQ7L8J4 393 aa18.02■□□□□ 0.47
PMS1-213ENST00000441310 ZC3H18Q86VM9 953 aaKnown RBP18.02■□□□□ 0.47
PMS1-213ENST00000441310 STMN4Q9H169 189 aaPredicted RBP18.02■□□□□ 0.47
PMS1-213ENST00000441310 FAM198AQ9UFP1 575 aa18.02■□□□□ 0.47
PMS1-213ENST00000441310 SUGT1Q9Y2Z0 365 aa18.02■□□□□ 0.47
PMS1-213ENST00000441310 E7ENQ6 273 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 EEF2P13639 858 aaKnown RBP18.01■□□□□ 0.47
PMS1-213ENST00000441310 KCNA3P22001 575 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 ADCY7P51828 1080 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 CCDC6Q16204 474 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 SPDYCQ5MJ68 293 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 DACT2Q5SW24 774 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 IRGCQ6NXR0 463 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 FLAD1Q8NFF5 587 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 ACTN1P12814 892 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 CACNA2D1P54289 1103 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 KIAA1755Q5JYT7 1200 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 CGB2Q6NT52 195 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 RBBP8NLQ8NC74 664 aaPredicted RBP18.01■□□□□ 0.47
PMS1-213ENST00000441310 NDNQ99608 321 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 CUEDC2Q9H467 287 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 PRKAG3Q9UGI9 489 aa18.01■□□□□ 0.47
PMS1-213ENST00000441310 POTEMA6NI47 508 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L15C9J2P7 530 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L13C9JLJ4 530 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L11C9JVI0 530 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L18D6R9N7 530 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L22D6RA61 530 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L17D6RBQ6 530 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L19D6RCP7 530 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L20D6RJB6 530 aa18■□□□□ 0.47
PMS1-213ENST00000441310 ZSCAN9O15535 394 aaPredicted RBP18■□□□□ 0.47
PMS1-213ENST00000441310 FAM163BP0C2L3 166 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L24Q0WX57 530 aa18■□□□□ 0.47
PMS1-213ENST00000441310 IKQ13123 557 aaPredicted RBP18■□□□□ 0.47
PMS1-213ENST00000441310 CERKLQ49MI3 558 aaPredicted RBP18■□□□□ 0.47
PMS1-213ENST00000441310 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
PMS1-213ENST00000441310 USP17L6PQ6QN14 398 aa18■□□□□ 0.47
PMS1-213ENST00000441310 JAMLQ86YT9 394 aa18■□□□□ 0.47
PMS1-213ENST00000441310 GBP5Q96PP8 586 aa18■□□□□ 0.47
PMS1-213ENST00000441310 TSG101Q99816 390 aa18■□□□□ 0.47
PMS1-213ENST00000441310 MYMKA6NI61 221 aa18■□□□□ 0.47
PMS1-213ENST00000441310 TPP2P29144 1249 aaPredicted RBP18■□□□□ 0.47
PMS1-213ENST00000441310 GSTT1P30711 240 aa18■□□□□ 0.47
PMS1-213ENST00000441310 EPS15P42566 896 aa18■□□□□ 0.47
PMS1-213ENST00000441310 KSR1Q8IVT5 923 aa18■□□□□ 0.47
PMS1-213ENST00000441310 IFT43Q96FT9 208 aa18■□□□□ 0.47
PMS1-213ENST00000441310 COL4A3BPQ9Y5P4 624 aa18■□□□□ 0.47
PMS1-213ENST00000441310 IGKV6D-41A0A0C4DH26 115 aa18■□□□□ 0.47
PMS1-213ENST00000441310 ATP9AO75110 1047 aa18■□□□□ 0.47
PMS1-213ENST00000441310 IMPDH2P12268 514 aa18■□□□□ 0.47
PMS1-213ENST00000441310 FAM136AQ96C01 138 aa18■□□□□ 0.47
PMS1-213ENST00000441310 TRAPPC9Q96Q05 1148 aa18■□□□□ 0.47
PMS1-213ENST00000441310 METTL5Q9NRN9 209 aaKnown RBP18■□□□□ 0.47
PMS1-213ENST00000441310 DNAAF2Q9NVR5 837 aaKnown RBP18■□□□□ 0.47
PMS1-213ENST00000441310 NAGPAQ9UK23 515 aa18■□□□□ 0.47
PMS1-213ENST00000441310 SCAF8Q9UPN6 1271 aaKnown RBP18■□□□□ 0.47
PMS1-213ENST00000441310 CLRN2A0PK11 232 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 RAD17O75943 681 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 ECEL1O95672 775 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 STX2P32856 288 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 SKIV2L2P42285 1042 aaKnown RBP17.99■□□□□ 0.47
PMS1-213ENST00000441310 ZC2HC1CQ53FD0 456 aaPredicted RBP17.99■□□□□ 0.47
PMS1-213ENST00000441310 NT5DC3Q86UY8 548 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 PRMT6Q96LA8 375 aaPredicted RBP17.99■□□□□ 0.47
PMS1-213ENST00000441310 ZDHHC15Q96MV8 337 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 TBC1D10AQ9BXI6 508 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 KIAA0391O15091 583 aaKnown RBP17.99■□□□□ 0.47
PMS1-213ENST00000441310 MARCH6O60337 910 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 NT5C2P49902 561 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 PTENP60484 403 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 LRRC63Q05C16 580 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 PARP6Q2NL67 630 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 RASIP1Q5U651 963 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 VSTM1Q6UX27 236 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 SV2BQ7L1I2 683 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 GUF1Q8N442 669 aaKnown RBP17.99■□□□□ 0.47
PMS1-213ENST00000441310 LRRC8CQ8TDW0 803 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 ZNF333Q96JL9 665 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 DENND2DQ9H6A0 471 aaPredicted RBP17.99■□□□□ 0.47
PMS1-213ENST00000441310 MAGEF1Q9HAY2 307 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 SUCLA2Q9P2R7 463 aaPredicted RBP17.99■□□□□ 0.47
PMS1-213ENST00000441310 CTNNAL1Q9UBT7 734 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.99■□□□□ 0.47
PMS1-213ENST00000441310 ABCB11O95342 1321 aa17.99■□□□□ 0.47
PMS1-213ENST00000441310 RIPK2O43353 540 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 SETDB1Q15047 1291 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 CALCRLQ16602 461 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 STRIP1Q5VSL9 837 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 SEPT14Q6ZU15 432 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 MIGA2Q7L4E1 593 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 AGGF1Q8N302 714 aaeCLIP17.98■□□□□ 0.47
PMS1-213ENST00000441310 PLEKHG4BQ96PX9 1271 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms