RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 XKR9Q5GH70 373 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 SPOUT1Q5T280 376 aaKnown RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 ISM2Q6H9L7 571 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 CENPPQ6IPU0 288 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 POTEGQ6S5H5 508 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 PPP4R3CPQ6ZMV5 832 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 HAS1Q92839 578 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 CEP170P1Q96L14 293 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 MBOAT7Q96N66 472 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 EIF3CQ99613 913 aaKnown RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 MTRQ99707 1265 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 NAPGQ99747 312 aaPredicted RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 LXNQ9BS40 222 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 APOL6Q9BWW8 343 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 TRIM9Q9C026 710 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 TTYH3Q9C0H2 523 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 AGO3Q9H9G7 860 aaKnown RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 GPRC5CQ9NQ84 441 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 EXOC1Q9NV70 894 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 LUC7L2Q9Y383 392 aaKnown RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 CYP3A7-CYP3A51PA0A087WV96 503 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 WDR64B1ANS9 1081 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 M0QZ92 97 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 CHRNA1P02708 482 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 PSAPP07602 524 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 SELPP16109 830 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 CYP3A7P24462 503 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 USP11P51784 963 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 EHHADHQ08426 723 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 PPIGQ13427 754 aaKnown RBP eCLIP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 GRIN2CQ14957 1233 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 SNX17Q15036 470 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 ARHGAP29Q52LW3 1261 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 TEX35Q5T0J7 233 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 MARCH8Q5T0T0 291 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 FKBP15Q5T1M5 1219 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 PPP2R2DQ66LE6 453 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 WDR93Q6P2C0 686 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 ABHD15Q6UXT9 468 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 TOGARAM2Q6ZUX3 1019 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 SV2BQ7L1I2 683 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 ZC3H3Q8IXZ2 948 aaKnown RBP5.2□□□□□ -1.58
EDEM3-203ENST00000439962 TMEM40Q8WWA1 233 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 CEP63Q96MT8 703 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 TOX2Q96NM4 488 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 YME1L1Q96TA2 773 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 SENP7Q9BQF6 1050 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 ACBD3Q9H3P7 528 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 VIPAS39Q9H9C1 493 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 PRDM6Q9NQX0 595 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 PSD3Q9NYI0 1048 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 Q9Y3F1 56 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 CFAP54Q96N23 3096 aa5.2□□□□□ -1.58
EDEM3-203ENST00000439962 KIAA0355O15063 1070 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 KRT86O43790 486 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 CASP14P31944 242 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 ICAM3P32942 547 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 CLCN6P51797 869 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 POLGP54098 1239 aaPredicted RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 ZNF697Q5TEC3 545 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 FAM160B1Q5W0V3 765 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 PAPD7Q5XG87 772 aaKnown RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 RAD9BQ6WBX8 426 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 FMNL3Q8IVF7 1028 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 GRAMD1CQ8IYS0 662 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 KIFC3Q9BVG8 833 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 ARFGAP3Q9NP61 516 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 IL23AQ9NPF7 189 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 TBC1D22BQ9NU19 505 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 RNF14Q9UBS8 474 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 MYO6Q9UM54 1294 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 INPP5FQ9Y2H2 1132 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 YBX2Q9Y2T7 364 aaKnown RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 FRMPD3Q5JV73 1810 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 RBBP6Q7Z6E9 1792 aaKnown RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 NRCAMQ92823 1304 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 DENND3A2RUS2 1198 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 TEX33O43247 280 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 STAM2O75886 525 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 NDUFA10O95299 355 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 IPO7O95373 1038 aaKnown RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 PNMA6AP0CW24 399 aaPredicted RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 GNAT1P11488 350 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 HARSP12081 509 aaKnown RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 SP100P23497 879 aaPredicted RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 ADKP55263 362 aaKnown RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 SETQ01105 290 aaPredicted RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 KRT76Q01546 638 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 GPNMBQ14956 572 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 MAN2A1Q16706 1144 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 ERCC6LQ2NKX8 1250 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 MTHFD1LQ6UB35 978 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 IRF2BP1Q8IU81 584 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 SLFN12Q8IYM2 578 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 GDPD5Q8WTR4 605 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 STAMQ92783 540 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 TIFAQ96CG3 184 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 TSG101Q99816 390 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 TTYH1Q9H313 450 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms