RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 HOXA2O43364 376 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 TRAK2O60296 914 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 MAPTP10636 758 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 IDEP14735 1019 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 NMT1P30419 496 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 COL4A4P53420 1690 aaPredicted RBP21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 ERVK-21P61565 698 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 EEF1DP3Q658K8 133 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 HAUS6Q7Z4H7 955 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 SFR1Q86XK3 245 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 HELQQ8TDG4 1101 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 PGBD4Q96DM1 585 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 GUCD1Q96NT3 240 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 CASD1Q96PB1 797 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 FIZ1Q96SL8 496 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 PYM1Q9BRP8 204 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 TRIM6Q9C030 488 aaPredicted RBP21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 PRDM12Q9H4Q4 367 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 HES2Q9Y543 173 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 IPPQ9Y573 584 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 MRPL42Q9Y6G3 142 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 TRANK1O15050 2925 aa21.42■■□□□ 1.02
SEMA3B-206ENST00000439487 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 FAM237AA0A1B0GTK4 181 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 EPOPA6NHQ4 379 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 K7ENM7 598 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 RFXAPO00287 272 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 NDUFA8P51970 172 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 AMPD3Q01432 767 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 ATF7IP2Q5U623 682 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 AGMOQ6ZNB7 445 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 FAM178BQ8IXR5 827 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 ABI1Q8IZP0 508 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 MRPS27Q92552 414 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 IPO9Q96P70 1041 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 TARS2Q9BW92 718 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 APOL6Q9BWW8 343 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 LRRC27Q9C0I9 530 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 TMEM117Q9H0C3 514 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 RNF39Q9H2S5 420 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 GOLPH3LQ9H4A5 285 aa21.41■■□□□ 1.02
SEMA3B-206ENST00000439487 CUL9Q8IWT3 2517 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 PRRC2BQ5JSZ5 2229 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 H0YCG3 227 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 ACTN4O43707 911 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 LINC00271P0C7V0 271 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 ITGA4P13612 1032 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 GAP43P17677 238 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 CASP1P29466 404 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 SYKP43405 635 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 AFMP43652 599 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 STRN3Q13033 797 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 GRAMD1CQ8IYS0 662 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 CEP57L1Q8IYX8 460 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 CNNM3Q8NE01 707 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 CDX2Q99626 313 aaPredicted RBP21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 ACO2Q99798 780 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 MRPL4Q9BYD3 311 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 TRIM9Q9C026 710 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 NXF3Q9H4D5 531 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 MAGEF1Q9HAY2 307 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 PANK4Q9NVE7 773 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 TBC1D7Q9P0N9 293 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 HCSTQ9UBK5 93 aa21.4■■□□□ 1.02
SEMA3B-206ENST00000439487 OFD1O75665 1012 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 SLFN14P0C7P3 912 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 HERC4Q5GLZ8 1057 aaPredicted RBP21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 LRRC55Q6ZSA7 311 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 TMEM192Q8IY95 271 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 MYLIPQ8WY64 445 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 C7orf25Q9BPX7 421 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 ADPGKQ9BRR6 497 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 BLZF1Q9H2G9 400 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 TYW1Q9NV66 732 aaKnown RBP21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 TNFSF13BQ9Y275 285 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 INPP5FQ9Y2H2 1132 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 PLXNA4Q9HCM2 1894 aa21.39■■□□□ 1.01
SEMA3B-206ENST00000439487 FRMD3A2A2Y4 597 aa21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 GOLGA6L4A6NEF3 574 aa21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 ASIC1P78348 528 aa21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 EPC2Q52LR7 807 aa21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 ZC2HC1CQ53FD0 456 aaPredicted RBP21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 SPOUT1Q5T280 376 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 CCDC65Q8IXS2 484 aa21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 CLP1Q92989 425 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 CWH43Q9H720 699 aa21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 MRPL44Q9H9J2 332 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 RSAD1Q9HA92 442 aa21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 TBX20Q9UMR3 447 aa21.38■■□□□ 1.01
SEMA3B-206ENST00000439487 ATG2AQ2TAZ0 1938 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 AKAP5P24588 427 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 CTNNB1P35222 781 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 BMPR1AP36894 532 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 COASYQ13057 564 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 GLB1LQ6UWU2 654 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 ZNF720Q7Z2F6 126 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 ZBTB33Q86T24 672 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 FBXO22Q8NEZ5 403 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 KCNN1Q92952 543 aa21.37■■□□□ 1.01
SEMA3B-206ENST00000439487 PAGE5Q96GU1 130 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms