RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 ERVK-5Q9HDB9 667 aa13.89□□□□□ -0.19
SCLT1-202ENST00000439369 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
SCLT1-202ENST00000439369 A0A1B0GUA9 196 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 POU5F1Q01860 360 aaKnown RBP13.88□□□□□ -0.19
SCLT1-202ENST00000439369 MCL1Q07820 350 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 PAK2Q13177 524 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 ANKRD40Q6AI12 368 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 NOTUMQ6P988 496 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 MPZL3Q6UWV2 235 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 APBB2Q92870 758 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 TARS2Q9BW92 718 aaKnown RBP13.88□□□□□ -0.19
SCLT1-202ENST00000439369 TRAIPQ9BWF2 469 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 PTPRHQ9HD43 1115 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 DMAC2Q9NW81 257 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 TANC1Q9C0D5 1861 aa13.88□□□□□ -0.19
SCLT1-202ENST00000439369 A0A0B4J269 797 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 CETN3O15182 167 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 MAPK13O15264 365 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 CLDN3O15551 220 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 LDHAP00338 332 aaKnown RBP13.87□□□□□ -0.19
SCLT1-202ENST00000439369 TIMP1P01033 207 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 CXCL10P02778 98 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 NR3C1P04150 777 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 MCF2P10911 925 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 ARF4P18085 180 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-202ENST00000439369 HOXA11P31270 313 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-202ENST00000439369 PMS1P54277 932 aaKnown RBP13.87□□□□□ -0.19
SCLT1-202ENST00000439369 TPM4P67936 248 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 IQCB1Q15051 598 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 DCAF4L1Q3SXM0 396 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 ARMCX5Q6P1M9 558 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 SLC39A4Q6P5W5 647 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 SLC27A1Q6PCB7 646 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 CSGALNACT2Q8N6G5 542 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 MED15Q96RN5 788 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 DUSP9Q99956 384 aaKnown RBP13.87□□□□□ -0.19
SCLT1-202ENST00000439369 ADPGKQ9BRR6 497 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 MKNK1Q9BUB5 465 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 FTHL17Q9BXU8 183 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 THAP9Q9H5L6 903 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 CBX8Q9HC52 389 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 PADI3Q9ULW8 664 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 ST3GAL5Q9UNP4 418 aa13.87□□□□□ -0.19
SCLT1-202ENST00000439369 CCDC85CA6NKD9 419 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 BECN2A8MW95 431 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 ANKRD63C9JTQ0 380 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 ABLIM1O14639 778 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 OGTO15294 1046 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 SLC16A3O15427 465 aaKnown RBP13.86□□□□□ -0.19
SCLT1-202ENST00000439369 B4GALT5O43286 388 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 CSDE1O75534 798 aaKnown RBP13.86□□□□□ -0.19
SCLT1-202ENST00000439369 GNA14O95837 355 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 EDN1P05305 212 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 PFKMP08237 780 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 GHRP10912 638 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 NR2F2P24468 414 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 ADSSP30520 456 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 ENPEPQ07075 957 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 MBTPS1Q14703 1052 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 NOLC1Q14978 699 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCLT1-202ENST00000439369 TPD52L1Q16890 204 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-202ENST00000439369 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 ZNF568Q3ZCX4 644 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 PLEKHG4Q58EX7 1191 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 LRRC55Q6ZSA7 311 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 FAM114A1Q8IWE2 563 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 AOPEPQ8N6M6 819 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 XXYLT1Q8NBI6 393 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 SEPT8Q92599 483 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 WNT8AQ9H1J5 351 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 PDZD7Q9H5P4 517 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 AGO3Q9H9G7 860 aaKnown RBP13.86□□□□□ -0.19
SCLT1-202ENST00000439369 PRKAG2Q9UGJ0 569 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 CENPFP49454 3210 aa13.86□□□□□ -0.19
SCLT1-202ENST00000439369 TRIM49BA6NDI0 452 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 GOLGA6L19H0YKK7 550 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 SKIP12755 728 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-202ENST00000439369 RAG1P15918 1043 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 CD52P31358 61 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 RAB27AP51159 221 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 STX17P56962 302 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 SPAG1Q07617 926 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 ADAM9Q13443 819 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 DSC3Q14574 896 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 NCAPHQ15003 741 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 MFSD5Q6N075 450 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 FILIP1Q7Z7B0 1213 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 DHX40Q8IX18 779 aaKnown RBP13.85□□□□□ -0.19
SCLT1-202ENST00000439369 TMEM199Q8N511 208 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 FBXL18Q96ME1 805 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 TCHPQ9BT92 498 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 IFIH1Q9BYX4 1025 aaKnown RBP13.85□□□□□ -0.19
SCLT1-202ENST00000439369 CDT1Q9H211 546 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-202ENST00000439369 HSPBP1Q9NZL4 362 aa13.85□□□□□ -0.19
SCLT1-202ENST00000439369 AGO2Q9UKV8 859 aaKnown RBP13.85□□□□□ -0.19
SCLT1-202ENST00000439369 PIN4Q9Y237 131 aaKnown RBP13.85□□□□□ -0.19
SCLT1-202ENST00000439369 FRMD4BQ9Y2L6 1034 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms