RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TSPAN1O60635 241 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 CSDE1O75534 798 aaKnown RBP22.64■■□□□ 1.21
CHD3-204ENST00000439235 CHRNA1P02708 482 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 EDN1P05305 212 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 IQCF3P0C7M6 154 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 AXLP30530 894 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 ZNF618Q5T7W0 954 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 CDKAL1Q5VV42 579 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 SLC39A4Q6P5W5 647 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 TSHZ1Q6ZSZ6 1077 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 TMEM40Q8WWA1 233 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 POMGNT1Q8WZA1 660 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 SAMSN1Q9NSI8 373 aaKnown RBP22.64■■□□□ 1.21
CHD3-204ENST00000439235 TNFSF13BQ9Y275 285 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 ATP11BQ9Y2G3 1177 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 STYXL1Q9Y6J8 313 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 SQORQ9Y6N5 450 aa22.64■■□□□ 1.21
CHD3-204ENST00000439235 TISP43B9A030 160 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 PITPNM1O00562 1244 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 SLC16A3O15427 465 aaKnown RBP22.63■■□□□ 1.21
CHD3-204ENST00000439235 B4GALT5O43286 388 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 GNA14O95837 355 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 MATR3P43243 847 aaKnown RBP eCLIP22.63■■□□□ 1.213e-8■■■□□ 14.8
CHD3-204ENST00000439235 CYP2J2P51589 502 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 TLE2Q04725 743 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 APBB1IPQ7Z5R6 666 aaPredicted RBP22.63■■□□□ 1.21
CHD3-204ENST00000439235 FILIP1Q7Z7B0 1213 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 USP38Q8NB14 1042 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 ANKRD20A12PQ8NF67 263 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 CBWD1Q9BRT8 395 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 DMAC2Q9NW81 257 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 HSPBP1Q9NZL4 362 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 ANKFY1Q9P2R3 1169 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 FRMD4BQ9Y2L6 1034 aa22.63■■□□□ 1.21
CHD3-204ENST00000439235 N4BP3O15049 544 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 CLDN3O15551 220 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 EXOC3O60645 756 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 RPS6KA5O75582 802 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 EPB41P11171 864 aaKnown RBP22.62■■□□□ 1.21
CHD3-204ENST00000439235 SELPP16109 830 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 ZNF18P17022 549 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 EN2P19622 333 aaPredicted RBP22.62■■□□□ 1.21
CHD3-204ENST00000439235 CDK11BP21127 795 aaKnown RBP22.62■■□□□ 1.21
CHD3-204ENST00000439235 FGFR4P22455 802 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 ZNF568Q3ZCX4 644 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 FBXO47Q5MNV8 452 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 MPZL3Q6UWV2 235 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 LRRC8DQ7L1W4 858 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 XXYLT1Q8NBI6 393 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 TCHPQ9BT92 498 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 MKNK1Q9BUB5 465 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 GRPEL1Q9HAV7 217 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 AGPAT5Q9NUQ2 364 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 USP20Q9Y2K6 914 aa22.62■■□□□ 1.21
CHD3-204ENST00000439235 NOC2LQ9Y3T9 749 aaKnown RBP22.62■■□□□ 1.21
CHD3-204ENST00000439235 GPR182O15218 404 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 ARF4P18085 180 aaPredicted RBP22.61■■□□□ 1.21
CHD3-204ENST00000439235 PROZP22891 400 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 EEF1GP26641 437 aaKnown RBP22.61■■□□□ 1.21
CHD3-204ENST00000439235 ADSSP30520 456 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 MCL1Q07820 350 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 FAAP100Q0VG06 881 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 NOLC1Q14978 699 aaKnown RBP eCLIP22.61■■□□□ 1.21
CHD3-204ENST00000439235 LRRC26Q2I0M4 334 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 CCDC40Q4G0X9 1142 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 CEP135Q66GS9 1140 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 NOTUMQ6P988 496 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 FAM228AQ86W67 206 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 CCDC51Q96ER9 411 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 CNOT6LQ96LI5 555 aaKnown RBP22.61■■□□□ 1.21
CHD3-204ENST00000439235 ADPGKQ9BRR6 497 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 HSD3B7Q9H2F3 369 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 PCIF1Q9H4Z3 704 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 PDZD7Q9H5P4 517 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 KIAA1586Q9HCI6 787 aa22.61■■□□□ 1.21
CHD3-204ENST00000439235 A0A0B4J269 797 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 TTLL13PA6NNM8 815 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 KCNJ18B7U540 433 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 LDHAP00338 332 aaKnown RBP22.6■■□□□ 1.21
CHD3-204ENST00000439235 CLTBP09497 229 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 PSMC2P35998 433 aaKnown RBP22.6■■□□□ 1.21
CHD3-204ENST00000439235 MRE11P49959 708 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 KCNJ12Q14500 433 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 HSP90AA4PQ58FG1 418 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 TRAF7Q6Q0C0 670 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 UBE2Q1Q7Z7E8 422 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 GPD1LQ8N335 351 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 EEF2KMTQ96G04 330 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 CPB2Q96IY4 423 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 MSTO1Q9BUK6 570 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 NOC4LQ9BVI4 516 aaKnown RBP22.6■■□□□ 1.21
CHD3-204ENST00000439235 HIPK3Q9H422 1215 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 PTPRHQ9HD43 1115 aa22.6■■□□□ 1.21
CHD3-204ENST00000439235 AGO2Q9UKV8 859 aaKnown RBP22.6■■□□□ 1.21
CHD3-204ENST00000439235 PIN4Q9Y237 131 aaKnown RBP22.6■■□□□ 1.21
CHD3-204ENST00000439235 A0A1B0GUA9 196 aa22.59■■□□□ 1.21
CHD3-204ENST00000439235 MAPK13O15264 365 aa22.59■■□□□ 1.21
CHD3-204ENST00000439235 MCF2P10911 925 aa22.59■■□□□ 1.21
CHD3-204ENST00000439235 GHRP10912 638 aa22.59■■□□□ 1.21
CHD3-204ENST00000439235 PAK2Q13177 524 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms