RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 MED24O75448 989 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 NR1I2O75469 434 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 SPATA31C1P0DKV0 1188 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 MLH1P40692 756 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 AFF1P51825 1210 aaKnown RBP20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 HAUS3Q68CZ6 603 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 ZBTB8OSQ8IWT0 167 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 EDAQ92838 391 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 NECTIN4Q96NY8 510 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 POLR3CQ9BUI4 534 aaPredicted RBP20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 EMILIN2Q9BXX0 1053 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 DBR1Q9UK59 544 aaKnown RBP20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 NR2E1Q9Y466 385 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 HES2Q9Y543 173 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 IRAK3Q9Y616 596 aa20.46■□□□□ 0.87
AC004540.1-201ENST00000439120 ARHGEF35A5YM69 484 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 ARL5CA6NH57 179 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 NRP1O14786 923 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 B4GALT3O60512 393 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 SSBP05455 408 aaKnown RBP eCLIP20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 ARF4P18085 180 aaPredicted RBP20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 SP100P23497 879 aaPredicted RBP20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 OR1G1P47890 313 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 TRAPPC10P48553 1259 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 TMEM132AQ24JP5 1023 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 SLC27A1Q6PCB7 646 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 POTEGQ6S5H5 508 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 ZBTB33Q86T24 672 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 PPFIBP1Q86W92 1011 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 MFSD14AQ96MC6 490 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 RIPOR3Q96MK2 946 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 GAD1Q99259 594 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 ADAM7Q9H2U9 754 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 GPRC5CQ9NQ84 441 aa20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 PRG3Q9Y2Y8 225 aaPredicted RBP20.45■□□□□ 0.86
AC004540.1-201ENST00000439120 RPA1P27694 616 aa20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 MTHFRP42898 656 aa20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 PTPN14Q15678 1187 aa20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 AMHR2Q16671 573 aa20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 RARS2Q5T160 578 aaKnown RBP20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 CABP7Q86V35 215 aa20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 RNF39Q9H2S5 420 aa20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 NXF3Q9H4D5 531 aaKnown RBP20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 MRPL17Q9NRX2 175 aaKnown RBP20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 GIT1Q9Y2X7 761 aa20.44■□□□□ 0.86
AC004540.1-201ENST00000439120 TDRD15B5MCY1 1934 aaKnown RBP20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 B4GALT5O43286 388 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 NPTXRO95502 500 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 URODP06132 367 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 EPCAMP16422 314 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 KLRC2P26717 231 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 CCT6AP40227 531 aaKnown RBP20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 SCNN1GP51170 649 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 C8orf34Q49A92 452 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 HFE2Q6ZVN8 426 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 PRIMPOLQ96LW4 560 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 ZFP42Q96MM3 310 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 VN1R3Q9BXE9 311 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 C2orf40Q9H1Z8 148 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 PRMT7Q9NVM4 692 aaPredicted RBP20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 SSX2IPQ9Y2D8 614 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 KIF3AQ9Y496 699 aa20.43■□□□□ 0.86
AC004540.1-201ENST00000439120 C2CD2LO14523 706 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 ZXDAP98168 799 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 PADI6Q6TGC4 694 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 TRIM67Q6ZTA4 783 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 CDR2LQ86X02 465 aaPredicted RBP20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 COLGALT2Q8IYK4 626 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 RPS6KC1Q96S38 1066 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 KIF2CQ99661 725 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 RAB34Q9BZG1 259 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 LRWD1Q9UFC0 647 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 PARP2Q9UGN5 583 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 CDH22Q9UJ99 828 aa20.42■□□□□ 0.86
AC004540.1-201ENST00000439120 A0A1B0GUA9 196 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 TMEM221A6NGB7 291 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 M0R296 226 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 INPPL1O15357 1258 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 ST18O60284 1047 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 SOD2P04179 222 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 MUTP22033 750 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 AKAP5P24588 427 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 ATAT1Q5SQI0 421 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 C12orf76Q8N812 135 aaPredicted RBP20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 DEPTORQ8TB45 409 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 COLEC11Q9BWP8 271 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 POMKQ9H5K3 350 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 STK24Q9Y6E0 443 aa20.41■□□□□ 0.86
AC004540.1-201ENST00000439120 WEE2P0C1S8 567 aa20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 LIG1P18858 919 aa20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 CYP11B2P19099 503 aa20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 FXR2P51116 673 aaKnown RBP eCLIP20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 NBR1Q14596 966 aa20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 PPP2R5AQ15172 486 aa20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 RABEP1Q15276 862 aa20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 MAPK6Q16659 721 aa20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 PTPN21Q16825 1174 aa20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 CDCA2Q69YH5 1023 aaPredicted RBP20.4■□□□□ 0.86
AC004540.1-201ENST00000439120 KIAA1841Q6NSI8 718 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms