RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RARRES1P49788 294 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 MAP1SQ66K74 1059 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 PASD1Q8IV76 773 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 LRRC71Q8N4P6 559 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 RNF34Q969K3 372 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 AP1M1Q9BXS5 423 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 STK33Q9BYT3 514 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 NUP188Q5SRE5 1749 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 A0A1W2PQJ5 194 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 CETPP11597 493 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 HERVK_113P62684 666 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 FBF1Q8TES7 1133 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 TARS2Q9BW92 718 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 A1CFQ9NQ94 594 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 CNOT8Q9UFF9 292 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 NUB1Q9Y5A7 615 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 ADAMTS7Q9UKP4 1686 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 CYP3A7-CYP3A51PA0A087WV96 503 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 TMEM150BA6NC51 233 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 MYL3P08590 195 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 RFX1P22670 979 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 CYP3A7P24462 503 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 PPP2R5CQ13362 524 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 VGLL4Q14135 290 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 KLHDC7AQ5VTJ3 777 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 DNAJC24Q6P3W2 148 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 P2RX7Q99572 595 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 CYP26B1Q9NR63 512 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 OLFML3Q9NRN5 406 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 UBE4BO95155 1302 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 IGSF9BQ9UPX0 1349 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 MYO5AQ9Y4I1 1855 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 CYP26A1O43174 497 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 OATP04181 439 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 PRKCBP05771 671 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 TCF7P36402 384 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 GPC5P78333 572 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 CNTN2Q02246 1040 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 ZNF699Q32M78 642 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 KRT71Q3SY84 523 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 PACS2Q86VP3 889 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 C4orf19Q8IY42 314 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 OPTNQ96CV9 577 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 OSBPL9Q96SU4 736 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 CBWD1Q9BRT8 395 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 WDR18Q9BV38 432 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 ADAM22Q9P0K1 906 aa12.41□□□□□ -0.42
TRAPPC9-202ENST00000438773 DAPK3O43293 454 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 MAP2K2P36507 400 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 ADCY1Q08828 1119 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 IFT88Q13099 833 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 GJB7Q6PEY0 223 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 TMEM106CQ9BVX2 250 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 MIS12Q9H081 205 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.4□□□□□ -0.429e-7■■■■■ 28.9
TRAPPC9-202ENST00000438773 ANAPC7Q9UJX3 599 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 REXO2Q9Y3B8 237 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 PLIN4Q96Q06 1357 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 ZNF185O15231 689 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 DYNC1LI2O43237 492 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 NPTX2P47972 431 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 CLNS1AP54105 237 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 PPFIA1Q13136 1202 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 CCDC91Q7Z6B0 441 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 TRIM59Q8IWR1 403 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 TBC1D31Q96DN5 1066 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 CAPS2Q9BXY5 557 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 TBX20Q9UMR3 447 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 PTPN22Q9Y2R2 807 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 LRRC10BA6NIK2 292 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 GUCY2CP25092 1073 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 SLC12A3P55017 1021 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 MYO1EQ12965 1108 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 MXD4Q14582 209 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 DUOXA2Q1HG44 320 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 SLC35G1Q2M3R5 365 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 RUFY4Q6ZNE9 571 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 NLGN2Q8NFZ4 835 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 DNAJC7Q99615 494 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 MED10Q9BTT4 135 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 ZNF148Q9UQR1 794 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 ASTN2O75129 1339 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 TJP1Q07157 1748 aa12.4□□□□□ -0.42
TRAPPC9-202ENST00000438773 ITGB4P16144 1822 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 LTBP4Q8N2S1 1624 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 PSMD10O75832 226 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 FGGP02679 453 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 SUPT20HL2P0C7V6 817 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 MYBL2P10244 700 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 CTNNA1P35221 906 aaKnown RBP12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 PEX19P40855 299 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 GPC3P51654 580 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 IL31RAQ8NI17 732 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 ETNPPLQ8TBG4 499 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 PARK7Q99497 189 aaKnown RBP12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 C11orf70Q9BRQ4 267 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 C17orf75Q9HAS0 396 aa12.4□□□□□ -0.43
TRAPPC9-202ENST00000438773 DAAM1Q9Y4D1 1078 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms