RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ERVK-9P63128 1117 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 RASA3Q14644 834 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 PLCB4Q15147 1175 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 HHIPL2Q6UWX4 724 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 APTXQ7Z2E3 356 aaKnown RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 SPATA21Q7Z572 469 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 MAP7D3Q8IWC1 876 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 PDCD7Q8N8D1 485 aaKnown RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 ATL2Q8NHH9 583 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 GBP5Q96PP8 586 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 LRRC37BQ96QE4 947 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 MTMR9Q96QG7 549 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 FAM213AQ9BRX8 229 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 THAP2Q9H0W7 228 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 AS3MTQ9HBK9 375 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 HSPBP1Q9NZL4 362 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 TTC7AQ9ULT0 858 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 PCDHGC5Q9Y5F6 944 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 GJA3Q9Y6H8 435 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 NID2Q14112 1375 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 UBE4BO95155 1302 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 MSH4O15457 936 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 CDH16O75309 829 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 BAG2O95816 211 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 CD58P19256 250 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 ITIH2P19823 946 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 KRT76Q01546 638 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 IZUMO3Q5VZ72 239 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 LRRC55Q6ZSA7 311 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 TRPM8Q7Z2W7 1104 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 PASD1Q8IV76 773 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 TRIM42Q8IWZ5 723 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 NKX2-3Q8TAU0 364 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 RUSC1Q9BVN2 902 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 ROPN1BQ9BZX4 212 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 VCX3BQ9H321 246 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 ROPN1Q9HAT0 212 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 AGPAT3Q9NRZ7 376 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 PRR12Q9ULL5 1215 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 MAD1L1Q9Y6D9 718 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 CES2O00748 559 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 RAD17O75943 681 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 PSAPP07602 524 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 MMP10P09238 476 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 ITGA4P13612 1032 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 SLC8A3P57103 927 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 STAT4Q14765 748 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 LONRF1Q17RB8 773 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 BSPRYQ5W0U4 402 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 SLFN12LQ6IEE8 588 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TMEM270Q6UE05 265 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 SYDE1Q6ZW31 735 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 APBB1IPQ7Z5R6 666 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 DNAAF5Q86Y56 855 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 PPP4R1Q8TF05 950 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 BAP1Q92560 729 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 RMDN3Q96TC7 470 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TRAIPQ9BWF2 469 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 CALN1Q9BXU9 219 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 ZNF341Q9BYN7 854 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 OSGEPQ9NPF4 335 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 GGT7Q9UJ14 662 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 FEM1BQ9UK73 627 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TACC3Q9Y6A5 838 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 GTPBP10A4D1E9 387 aaKnown RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 FOXN3O00409 490 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TXNDC9O14530 226 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TLR3O15455 904 aaKnown RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 MYBL1P10243 752 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 FECHP22830 423 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 PSMC5P62195 406 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TFAMQ00059 246 aaKnown RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 EVX2Q03828 476 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TTMPQ5BVD1 217 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 DCAF15Q66K64 600 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 MIS18BP1Q6P0N0 1132 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 LDHDQ86WU2 507 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TMEM35BQ8NCS4 154 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 SLC30A5Q8TAD4 765 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 FBXO25Q8TCJ0 367 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 VCPKMTQ9H867 229 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 STK32BQ9NY57 414 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 HERC5Q9UII4 1024 aaKnown RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TRAF3IP3Q9Y228 551 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 RGPD1P0DJD0 1748 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TULP2O00295 520 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 P4HA2O15460 535 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 LDHAP00338 332 aaKnown RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 ESRRAP11474 423 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TNFRSF8P28908 595 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 CCND2P30279 289 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 SLC1A1P43005 524 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 ARL4CP56559 192 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 MAP7D1Q3KQU3 841 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 CYB5D1Q6P9G0 228 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 ERICH1Q86X53 443 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 COL23A1Q86Y22 540 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 GLIS3Q8NEA6 775 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 SH2D3AQ9BRG2 576 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms