RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 INO80B-WBP1J3KQ70 363 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 FLT3P36888 993 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 GRM1Q13255 1194 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 CLUL1Q15846 466 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 EDRF1Q3B7T1 1238 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 CALN1Q9BXU9 219 aa12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 INO80BQ9C086 356 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-206ENST00000437932 CORO7P57737 925 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 CBWD2Q8IUF1 395 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 SEC16BQ96JE7 1060 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 ADAM22Q9P0K1 906 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 PCSK1NQ9UHG2 260 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 TTLL3Q9Y4R7 772 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 ZHX2Q9Y6X8 837 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 TCP11X1B4DZS4 312 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 GOLGA8RI6L899 631 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 SPOPLQ6IQ16 392 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 KIF2BQ8N4N8 673 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 PAF1Q8N7H5 531 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 SMC6Q96SB8 1091 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 POLRMTO00411 1230 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 NFIBO00712 420 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 PSAPP07602 524 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 CDK17Q00537 523 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 RFX8Q6ZV50 586 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 MYH2Q9UKX2 1941 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 ZNF233A6NK53 670 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 F8VZ95 297 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 ADRA2BP18089 450 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 EPHA7Q15375 998 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 C6orf118Q5T5N4 469 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 STRIP1Q5VSL9 837 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 DNAJC24Q6P3W2 148 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 LRRC8CQ8TDW0 803 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 ATP6V0A1Q93050 837 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 PPP1R12CQ9BZL4 782 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 GINM1Q9NU53 330 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 NUP188Q5SRE5 1749 aa12.47□□□□□ -0.41
PDLIM5-206ENST00000437932 CCDC195A0A1B0GUA6 201 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 H7C0C1 242 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 RTN2O75298 545 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 GNA15P30679 374 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 ATP5OP48047 213 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 MMS22LQ6ZRQ5 1243 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 FAM160B2Q86V87 743 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 SPATS2Q86XZ4 545 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 KCTD6Q8NC69 237 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 ECT2Q9H8V3 914 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 MAD1L1Q9Y6D9 718 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 PHF2O75151 1096 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 PRUNE1Q86TP1 453 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 KAT5Q92993 513 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 RASSF10A6NK89 507 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 RASA4BC9J798 803 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 DDX3XO00571 662 aaKnown RBP eCLIP12.46□□□□□ -0.418e-10■■■□□ 15.6
PDLIM5-206ENST00000437932 MEFVO15553 781 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 RASA4O43374 803 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 SLITRK3O94933 977 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 ARSHQ5FYA8 562 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 ICE2Q659A1 982 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 CDR2LQ86X02 465 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 N4BP2L2Q92802 583 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 C9orf72Q96LT7 481 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 RNF146Q9NTX7 359 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 C4AP0C0L4 1744 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 C4BP0C0L5 1744 aa12.46□□□□□ -0.41
PDLIM5-206ENST00000437932 GJB6O95452 261 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 KITP10721 976 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 SCP2P22307 547 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 ADCY2Q08462 1091 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 KRT39Q6A163 491 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 RBM46Q8TBY0 533 aaKnown RBP12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 RAPGEF5Q92565 580 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 CHMP6Q96FZ7 201 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 SLITRK6Q9H5Y7 841 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 CNOT10Q9H9A5 744 aaKnown RBP12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 TMBIM4Q9HC24 238 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 SLMAPQ14BN4 828 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 FIGNQ5HY92 759 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 SULF1Q8IWU6 871 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 SLC7A3Q8WY07 619 aa12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 SYN2Q92777 582 aaPredicted RBP12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 TGS1Q96RS0 853 aaKnown RBP12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 DDX23Q9BUQ8 820 aaKnown RBP12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 GLIS2Q9BZE0 524 aaPredicted RBP12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 MARF1Q9Y4F3 1742 aaKnown RBP12.46□□□□□ -0.42
PDLIM5-206ENST00000437932 LAMB4A4D0S4 1761 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 H0Y3Z8 333 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 SUN1O94901 812 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 TNNC2P02585 160 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 SHBGP04278 402 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 SAT1P21673 171 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 SMARCA1P28370 1054 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 ALDH3A1P30838 453 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 HSPA1LP34931 641 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 BBS9Q3SYG4 887 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 MAIP1Q8WWC4 291 aa12.45□□□□□ -0.42
PDLIM5-206ENST00000437932 MCUR1Q96AQ8 359 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms