RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 FAM167AQ96KS9 214 aa27.87■■■□□ 2.05
CPNE1-216ENST00000437340 PACSIN1Q9BY11 444 aa27.87■■■□□ 2.05
CPNE1-216ENST00000437340 OGFRQ9NZT2 677 aa27.87■■■□□ 2.05
CPNE1-216ENST00000437340 PDHXO00330 501 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 DDX3XO00571 662 aaKnown RBP eCLIP27.86■■■□□ 2.051e-13■■■□□ 15.3
CPNE1-216ENST00000437340 KIAA0391O15091 583 aaKnown RBP27.86■■■□□ 2.05
CPNE1-216ENST00000437340 KRT39Q6A163 491 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 GPD1LQ8N335 351 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 SAAL1Q96ER3 474 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 SYT11Q9BT88 431 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 R3HDMLQ9H3Y0 253 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 KIAA1586Q9HCI6 787 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 TMEM8AQ9HCN3 771 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 COQ4Q9Y3A0 265 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 ZRANB2O95218 330 aaKnown RBP eCLIP27.86■■■□□ 2.051e-6■■□□□ 12.9
CPNE1-216ENST00000437340 PGK2P07205 417 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 ZNF157P51786 506 aaPredicted RBP27.86■■■□□ 2.05
CPNE1-216ENST00000437340 ITIH3Q06033 890 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 KIF22Q14807 665 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 CREG2Q8IUH2 290 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 SMC1BQ8NDV3 1235 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 OSBPL9Q96SU4 736 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 TLR10Q9BXR5 811 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 SLC45A1Q9Y2W3 748 aa27.86■■■□□ 2.05
CPNE1-216ENST00000437340 A0A0A6YYK5 440 aaPredicted RBP27.85■■■□□ 2.05
CPNE1-216ENST00000437340 ATP8B1O43520 1251 aa27.85■■■□□ 2.05
CPNE1-216ENST00000437340 PNMA6AP0CW24 399 aaPredicted RBP27.85■■■□□ 2.05
CPNE1-216ENST00000437340 TCF7P36402 384 aaPredicted RBP27.85■■■□□ 2.05
CPNE1-216ENST00000437340 ERVK-9P63128 1117 aa27.85■■■□□ 2.05
CPNE1-216ENST00000437340 ANKRD23Q86SG2 305 aa27.85■■■□□ 2.05
CPNE1-216ENST00000437340 CAGE1Q8TC20 777 aa27.85■■■□□ 2.05
CPNE1-216ENST00000437340 BICD1Q96G01 975 aa27.85■■■□□ 2.05
CPNE1-216ENST00000437340 CAPZA3Q96KX2 299 aa27.85■■■□□ 2.05
CPNE1-216ENST00000437340 STYXL1Q9Y6J8 313 aa27.85■■■□□ 2.05
CPNE1-216ENST00000437340 PALMO75781 387 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 PIGRP01833 764 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 H2AFZP0C0S5 128 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 GLRA2P23416 452 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 CYP24A1Q07973 514 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 STRN3Q13033 797 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 LY6KQ17RY6 165 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 H2AFVQ71UI9 128 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 NOA1Q8NC60 698 aaKnown RBP27.84■■■□□ 2.05
CPNE1-216ENST00000437340 OLIG1Q8TAK6 271 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 TMEM143Q96AN5 459 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 AZI2Q9H6S1 392 aa27.84■■■□□ 2.05
CPNE1-216ENST00000437340 UBE2TQ9NPD8 197 aaPredicted RBP27.84■■■□□ 2.05
CPNE1-216ENST00000437340 LRRIQ3A6PVS8 624 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-216ENST00000437340 ARHGAP44Q17R89 818 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 CC2D1AQ6P1N0 951 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-216ENST00000437340 EEPD1Q7L9B9 569 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 ASAP3Q8TDY4 903 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 HNRNPLLQ8WVV9 542 aaKnown RBP27.83■■■□□ 2.05
CPNE1-216ENST00000437340 PTPN18Q99952 460 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 RNF14Q9UBS8 474 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 MYH10P35580 1976 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 ZNF185O15231 689 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 LIG4P49917 911 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 CELF3Q5SZQ8 465 aaKnown RBP27.83■■■□□ 2.05
CPNE1-216ENST00000437340 RGMBQ6NW40 437 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 DEPTORQ8TB45 409 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 LNX1Q8TBB1 728 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-216ENST00000437340 ARFGAP3Q9NP61 516 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 FAM53CQ9NYF3 392 aa27.83■■■□□ 2.05
CPNE1-216ENST00000437340 FOXN3O00409 490 aaPredicted RBP27.82■■■□□ 2.04
CPNE1-216ENST00000437340 MAFO75444 373 aaPredicted RBP27.82■■■□□ 2.04
CPNE1-216ENST00000437340 LGR5O75473 907 aa27.82■■■□□ 2.04
CPNE1-216ENST00000437340 GPC3P51654 580 aa27.82■■■□□ 2.04
CPNE1-216ENST00000437340 ARHGEF19Q8IW93 802 aa27.82■■■□□ 2.04
CPNE1-216ENST00000437340 EXOC8Q8IYI6 725 aa27.82■■■□□ 2.04
CPNE1-216ENST00000437340 CCDC127Q96BQ5 260 aa27.82■■■□□ 2.04
CPNE1-216ENST00000437340 TMEM134Q9H6X4 195 aa27.82■■■□□ 2.04
CPNE1-216ENST00000437340 ZNF233A6NK53 670 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 EXTL3O43909 919 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 ARIH2O95376 493 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 MEI1Q5TIA1 1274 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 NFRKBQ6P4R8 1299 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 PLPPR4Q7Z2D5 763 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 U2AF1L4Q8WU68 220 aaKnown RBP27.81■■■□□ 2.04
CPNE1-216ENST00000437340 BBXQ8WY36 941 aaPredicted RBP27.81■■■□□ 2.04
CPNE1-216ENST00000437340 GPR20Q99678 358 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 ARID3AQ99856 593 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 TLL2Q9Y6L7 1015 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 ASB14A6NK59 587 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 PDE2AO00408 941 aaPredicted RBP27.81■■■□□ 2.04
CPNE1-216ENST00000437340 SLFN12LQ6IEE8 588 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 FBXL13Q8NEE6 735 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 COG1Q8WTW3 980 aa27.81■■■□□ 2.04
CPNE1-216ENST00000437340 ZNFX1Q9P2E3 1918 aaKnown RBP27.8■■■□□ 2.04
CPNE1-216ENST00000437340 GRID2IPA4D2P6 1211 aa27.8■■■□□ 2.04
CPNE1-216ENST00000437340 K7ERI5 159 aa27.8■■■□□ 2.04
CPNE1-216ENST00000437340 GAS2O43903 313 aaKnown RBP27.8■■■□□ 2.04
CPNE1-216ENST00000437340 RHOXF2BP0C7M4 288 aa27.8■■■□□ 2.04
CPNE1-216ENST00000437340 CCNA1P78396 465 aa27.8■■■□□ 2.04
CPNE1-216ENST00000437340 MAP2K1Q02750 393 aaPredicted RBP27.8■■■□□ 2.04
CPNE1-216ENST00000437340 WDR93Q6P2C0 686 aa27.8■■■□□ 2.04
CPNE1-216ENST00000437340 CCDC62Q6P9F0 684 aa27.8■■■□□ 2.04
CPNE1-216ENST00000437340 GLYCTKQ8IVS8 523 aa27.8■■■□□ 2.04
CPNE1-216ENST00000437340 PNKPQ96T60 521 aa27.8■■■□□ 2.04
CPNE1-216ENST00000437340 RHOXF2Q9BQY4 288 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms