RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 KRT83P78385 493 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 GFPT1Q06210 699 aaPredicted RBP22.95■■□□□ 1.26
PTPRF-207ENST00000436724 ASTE1Q2TB18 679 aaPredicted RBP22.95■■□□□ 1.26
PTPRF-207ENST00000436724 SLC9C1Q4G0N8 1177 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 EFCAB12Q6NXP0 572 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 GPD1LQ8N335 351 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 LMO3Q8TAP4 145 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 PARD3BQ8TEW8 1205 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 LACRTQ9GZZ8 138 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 TOPORSQ9NS56 1045 aaPredicted RBP22.95■■□□□ 1.26
PTPRF-207ENST00000436724 SUCLA2Q9P2R7 463 aaPredicted RBP22.95■■□□□ 1.26
PTPRF-207ENST00000436724 GUCA1BQ9UMX6 200 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 IPO7O95373 1038 aaKnown RBP22.94■■□□□ 1.26
PTPRF-207ENST00000436724 SERPING1P05155 500 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 CYP2C19P33261 490 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 KIAA1328Q86T90 577 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 OR6J1Q8NGC5 347 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 LENG1Q96BZ8 264 aaPredicted RBP22.94■■□□□ 1.26
PTPRF-207ENST00000436724 FAM84AQ96KN4 292 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 TMEM117Q9H0C3 514 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.94■■□□□ 1.267e-8■■■■■ 186.3
PTPRF-207ENST00000436724 ANKFY1Q9P2R3 1169 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 LRRIQ3A6PVS8 624 aaPredicted RBP22.94■■□□□ 1.26
PTPRF-207ENST00000436724 PPFIA4O75335 1185 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 ABCD1P33897 745 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 JAM2P57087 298 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 ASIC2Q16515 512 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 TCP11Q8WWU5 503 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 ZFYVE28Q9HCC9 887 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 FBXL5Q9UKA1 691 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 DUSP10Q9Y6W6 482 aa22.94■■□□□ 1.26
PTPRF-207ENST00000436724 KIF3CO14782 793 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 KIF5CO60282 957 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 C22orf31O95567 290 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 MMP3P08254 477 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 ACOT2P49753 483 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 MAP2K1Q02750 393 aaPredicted RBP22.93■■□□□ 1.26
PTPRF-207ENST00000436724 TNFAIP2Q03169 654 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 CYP24A1Q07973 514 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 ELF2Q15723 593 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 ZNF569Q5MCW4 686 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 IQSEC1Q6DN90 963 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 PHLDB3Q6NSJ2 640 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 PAXIP1Q6ZW49 1069 aaPredicted RBP22.93■■□□□ 1.26
PTPRF-207ENST00000436724 IRF2BP2Q7Z5L9 587 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 LRRN4CLQ8ND94 238 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 KCNN1Q92952 543 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 CCDC102AQ96A19 550 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 MFSD14AQ96MC6 490 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 NLRP4Q96MN2 994 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 TMEM134Q9H6X4 195 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 H3BRB1 525 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 GAS2O43903 313 aaKnown RBP22.93■■□□□ 1.26
PTPRF-207ENST00000436724 DLATP10515 647 aaKnown RBP22.93■■□□□ 1.26
PTPRF-207ENST00000436724 CTGFP29279 349 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 MXI1P50539 228 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 NLRP11P59045 1033 aaKnown RBP22.93■■□□□ 1.26
PTPRF-207ENST00000436724 IRX5P78411 483 aaPredicted RBP22.93■■□□□ 1.26
PTPRF-207ENST00000436724 KLHL30Q0D2K2 578 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 MAPK8IP2Q13387 824 aaPredicted RBP22.93■■□□□ 1.26
PTPRF-207ENST00000436724 MXD4Q14582 209 aaPredicted RBP22.93■■□□□ 1.26
PTPRF-207ENST00000436724 SPA17Q15506 151 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 CCDC122Q5T0U0 273 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 EHBP1Q8NDI1 1231 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 USP6NLQ92738 828 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 HAUS4Q9H6D7 363 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 TUT1Q9H6E5 874 aaKnown RBP22.93■■□□□ 1.26
PTPRF-207ENST00000436724 APEX2Q9UBZ4 518 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 DNAJC12Q9UKB3 198 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 STYXL1Q9Y6J8 313 aa22.93■■□□□ 1.26
PTPRF-207ENST00000436724 SSU72P8A0A1W2PR75 194 aa22.92■■□□□ 1.26
PTPRF-207ENST00000436724 PIGRP01833 764 aa22.92■■□□□ 1.26
PTPRF-207ENST00000436724 KLRC1P26715 233 aa22.92■■□□□ 1.26
PTPRF-207ENST00000436724 CASQ1P31415 396 aa22.92■■□□□ 1.26
PTPRF-207ENST00000436724 ZBTB41Q5SVQ8 909 aa22.92■■□□□ 1.26
PTPRF-207ENST00000436724 AGO2Q9UKV8 859 aaKnown RBP22.92■■□□□ 1.26
PTPRF-207ENST00000436724 MSCO60682 206 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 HOXC6P09630 235 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 MATR3P43243 847 aaKnown RBP eCLIP22.91■■□□□ 1.262e-6■■■□□ 15.7
PTPRF-207ENST00000436724 WNT7BP56706 349 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 SREBF2Q12772 1141 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 EPC2Q52LR7 807 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 SEZ6Q53EL9 994 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 EXOC8Q8IYI6 725 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 MSL3Q8N5Y2 521 aaKnown RBP22.91■■□□□ 1.26
PTPRF-207ENST00000436724 JAKMIP2Q96AA8 810 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 IFIH1Q9BYX4 1025 aaKnown RBP22.91■■□□□ 1.26
PTPRF-207ENST00000436724 CCDC113Q9H0I3 377 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 DNAH12Q6ZR08 3092 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 DYNC1LI2O43237 492 aaPredicted RBP22.91■■□□□ 1.26
PTPRF-207ENST00000436724 EXTL3O43909 919 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 LCA5LO95447 670 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 PTK2Q05397 1052 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 CDCA2Q69YH5 1023 aaPredicted RBP22.91■■□□□ 1.26
PTPRF-207ENST00000436724 CYP4F22Q6NT55 531 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 PPP1R13LQ8WUF5 828 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 PPP1R16BQ96T49 567 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 PRDM10Q9NQV6 1147 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 OGFRQ9NZT2 677 aa22.91■■□□□ 1.26
PTPRF-207ENST00000436724 GJD2Q9UKL4 321 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms