RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 NOTUMQ6P988 496 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 TMC5Q6UXY8 1006 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 CABP7Q86V35 215 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 SLC22A17Q8WUG5 538 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 RIPOR3Q96MK2 946 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 ZFP42Q96MM3 310 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 GAD1Q99259 594 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 TMEM175Q9BSA9 504 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 EMILIN2Q9BXX0 1053 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 CSRNP2Q9H175 543 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 GPRC5CQ9NQ84 441 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 DZANK1Q9NVP4 752 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 KANSL3Q9P2N6 904 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 NR2E1Q9Y466 385 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 IRAK3Q9Y616 596 aa9.89□□□□□ -0.83
CTDSPL-205ENST00000436654 LOXHD1Q8IVV2 1947 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 ARL5CA6NH57 179 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 LRRIQ4A6NIV6 560 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 F8W810 466 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 MED24O75448 989 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 NPTXRO95502 500 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 CNPP09543 421 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 SPATA31C1P0DKV0 1188 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 MYBP10242 640 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 ARF4P18085 180 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 AKAP5P24588 427 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 AXLP30530 894 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 MTHFRP42898 656 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 FOXK2Q01167 660 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 SIGLEC14Q08ET2 396 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 GIT2Q14161 759 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 ZNF174Q15697 407 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 IER5LQ5T953 404 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 ERICH6BQ5W0A0 696 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 TAS1R1Q7RTX1 841 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 BMP8AQ7Z5Y6 402 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 SUGP1Q8IWZ8 645 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 FBXL6Q8N531 539 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 KREMEN2Q8NCW0 462 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 CNNM3Q8NE01 707 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 CCDC51Q96ER9 411 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 C8orf76Q96K31 380 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 NECTIN4Q96NY8 510 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 KLHL5Q96PQ7 755 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 TRIM6Q9C030 488 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 NXF3Q9H4D5 531 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 UBN1Q9NPG3 1134 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 MARCH5Q9NX47 278 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 MIOSQ9NXC5 875 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 DBR1Q9UK59 544 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 LIMCH1Q9UPQ0 1083 aa9.88□□□□□ -0.83
CTDSPL-205ENST00000436654 EVPLQ92817 2033 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 ST18O60284 1047 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 EIF5BO60841 1220 aaKnown RBP9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 LILRB3O75022 631 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 PDGFBP01127 241 aaPredicted RBP9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 URODP06132 367 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 ASGR2P07307 311 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 LIG1P18858 919 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 CLCN4P51793 760 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 POU5F1BQ06416 359 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 PCBP1Q15365 356 aaKnown RBP eCLIP9.87□□□□□ -0.839e-6■■■■■ 29.7
CTDSPL-205ENST00000436654 ATAT1Q5SQI0 421 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 KIAA1841Q6NSI8 718 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 POTEGQ6S5H5 508 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 PPFIBP1Q86W92 1011 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 CATSPER3Q86XQ3 398 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 COLGALT2Q8IYK4 626 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 TDRD5Q8NAT2 981 aaKnown RBP9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 PRSS33Q8NF86 280 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 RABGGTAQ92696 567 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 ASIC4Q96FT7 647 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 SMOC2Q9H3U7 446 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 MRPL17Q9NRX2 175 aaKnown RBP9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 KLK14Q9P0G3 267 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 PARP2Q9UGN5 583 aa9.87□□□□□ -0.83
CTDSPL-205ENST00000436654 ARHGEF35A5YM69 484 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 TTLL13PA6NNM8 815 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 INPPL1O15357 1258 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 BRD1O95696 1058 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 SOD2P04179 222 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 OR52Z1P0C646 297 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 XRCC6P12956 609 aaKnown RBP eCLIP9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 VCPP55072 806 aaKnown RBP9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 DSC1Q08554 894 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 GNL2Q13823 731 aaKnown RBP9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 NBR1Q14596 966 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 TMEM132AQ24JP5 1023 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 SLC27A1Q6PCB7 646 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 HACE1Q8IYU2 909 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 MCPH1Q8NEM0 835 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 ERMNQ8TAM6 284 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 B3GALT6Q96L58 329 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 NACC1Q96RE7 527 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 HERC2P3Q9BVR0 1158 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 NFKBIZQ9BYH8 718 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 SFXN1Q9H9B4 322 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 POLD4Q9HCU8 107 aa9.86□□□□□ -0.83
CTDSPL-205ENST00000436654 TUFT1Q9NNX1 390 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms