RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 SMAD4Q13485 552 aaKnown RBP12.1□□□□□ -0.47
HMGCL-204ENST00000436439 ECM1Q16610 540 aa12.1□□□□□ -0.47
HMGCL-204ENST00000436439 ODR4Q5SWX8 454 aa12.1□□□□□ -0.47
HMGCL-204ENST00000436439 LRRC55Q6ZSA7 311 aa12.1□□□□□ -0.47
HMGCL-204ENST00000436439 SV2BQ7L1I2 683 aa12.1□□□□□ -0.47
HMGCL-204ENST00000436439 MIER3Q7Z3K6 550 aa12.1□□□□□ -0.47
HMGCL-204ENST00000436439 EFHBQ8N7U6 833 aa12.1□□□□□ -0.47
HMGCL-204ENST00000436439 COLGALT1Q8NBJ5 622 aa12.1□□□□□ -0.47
HMGCL-204ENST00000436439 C7orf25Q9BPX7 421 aa12.1□□□□□ -0.47
HMGCL-204ENST00000436439 TMEM161AQ9NX61 479 aa12.1□□□□□ -0.47
HMGCL-204ENST00000436439 BARX2Q9UMQ3 279 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-204ENST00000436439 TMEM150BA6NC51 233 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 PER2O15055 1255 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 MAGEB2O15479 319 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 FGF18O76093 207 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 LYPLA2O95372 231 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 EYA4O95677 639 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 AFMP43652 599 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 GPC3P51654 580 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 DRP2Q13474 957 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 STX1AQ16623 288 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 KCNK18Q7Z418 384 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 VN1R2Q8NFZ6 395 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 FAM167AQ96KS9 214 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 CEP89Q96ST8 783 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 SH2D3AQ9BRG2 576 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 ELAC1Q9H777 363 aaKnown RBP12.09□□□□□ -0.47
HMGCL-204ENST00000436439 ATP6V0A4Q9HBG4 840 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 KIAA1024Q9UPX6 916 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 DNM3Q9UQ16 869 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
HMGCL-204ENST00000436439 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
HMGCL-204ENST00000436439 CSDE1O75534 798 aaKnown RBP12.08□□□□□ -0.48
HMGCL-204ENST00000436439 STBD1O95210 358 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 EIF4BP23588 611 aaKnown RBP12.08□□□□□ -0.48
HMGCL-204ENST00000436439 PBX3P40426 434 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 NLRP12P59046 1061 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 KCNB1Q14721 858 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 TARBP2Q15633 366 aaKnown RBP12.08□□□□□ -0.48
HMGCL-204ENST00000436439 ZRSR1Q15695 479 aaKnown RBP12.08□□□□□ -0.48
HMGCL-204ENST00000436439 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 C4orf19Q8IY42 314 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 THNSL1Q8IYQ7 743 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 GRAMD1CQ8IYS0 662 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-204ENST00000436439 SMRP1Q8NCR6 262 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 ERCC4Q92889 916 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-204ENST00000436439 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 DYDC2Q96IM9 177 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 MAP7D2Q96T17 732 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 PLIN2Q99541 437 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 GTPBP4Q9BZE4 634 aaKnown RBP12.08□□□□□ -0.48
HMGCL-204ENST00000436439 TRIM9Q9C026 710 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 TLR9Q9NR96 1032 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 NRBP2Q9NSY0 501 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 ANO10Q9NW15 660 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 MUTYHQ9UIF7 546 aa12.08□□□□□ -0.48
HMGCL-204ENST00000436439 PVALEFA0A1B0GWK0 134 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 FSCN2O14926 492 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.48
HMGCL-204ENST00000436439 DARSP14868 501 aaKnown RBP12.07□□□□□ -0.48
HMGCL-204ENST00000436439 TMOD1P28289 359 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-204ENST00000436439 QARSP47897 775 aaKnown RBP12.07□□□□□ -0.48
HMGCL-204ENST00000436439 SLC12A3P55017 1021 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 PSMC5P62195 406 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 UBE3AQ05086 875 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 COASYQ13057 564 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 CUL4BQ13620 913 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 MORC3Q14149 939 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 MCM6Q14566 821 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 DUSP6Q16828 381 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 MTERF2Q49AM1 385 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 CT47A1Q5JQC4 288 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-204ENST00000436439 CLLU1OSQ5K130 101 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 FAM43BQ6ZT52 329 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-204ENST00000436439 ECHDC2Q86YB7 292 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 RNF135Q8IUD6 432 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 NACC1Q96RE7 527 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 LXNQ9BS40 222 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 TMEM117Q9H0C3 514 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 TLE6Q9H808 572 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 RMND1Q9NWS8 449 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 RGL1Q9NZL6 768 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 KCND2Q9NZV8 630 aa12.07□□□□□ -0.48
HMGCL-204ENST00000436439 TRIOO75962 3097 aa12.06□□□□□ -0.48
HMGCL-204ENST00000436439 ESPNB1AK53 854 aa12.06□□□□□ -0.48
HMGCL-204ENST00000436439 E9PMD0 336 aa12.06□□□□□ -0.48
HMGCL-204ENST00000436439 KLRC4O43908 158 aa12.06□□□□□ -0.48
HMGCL-204ENST00000436439 RHOBTB3O94955 611 aa12.06□□□□□ -0.48
HMGCL-204ENST00000436439 PLA2G4BP0C869 781 aa12.06□□□□□ -0.48
HMGCL-204ENST00000436439 ZSCAN20P17040 1043 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-204ENST00000436439 ATF7P17544 494 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms