RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 TFR2Q9UP52 801 aa23.83■■□□□ 1.4
TOP2B-204ENST00000435706 K7ERI5 159 aa23.83■■□□□ 1.4
TOP2B-204ENST00000435706 LDHAP00338 332 aaKnown RBP23.83■■□□□ 1.4
TOP2B-204ENST00000435706 LRRC4Q9HBW1 653 aa23.83■■□□□ 1.4
TOP2B-204ENST00000435706 H3BRJ5 948 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 RTN2O75298 545 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 PSAPP07602 524 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 UBTFL6P0CB48 400 aaPredicted RBP23.82■■□□□ 1.4
TOP2B-204ENST00000435706 OLFML2BQ68BL8 750 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP49Q70CQ1 688 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 C4orf33Q8N1A6 199 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 SH3RF3Q8TEJ3 882 aaPredicted RBP23.82■■□□□ 1.4
TOP2B-204ENST00000435706 FAM20AQ96MK3 541 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 DDX56Q9NY93 547 aaKnown RBP23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L15C9J2P7 530 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L13C9JLJ4 530 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L11C9JVI0 530 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L18D6R9N7 530 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L22D6RA61 530 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L17D6RBQ6 530 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L19D6RCP7 530 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L20D6RJB6 530 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 TDP2O95551 362 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 FDPSP14324 419 aaKnown RBP23.82■■□□□ 1.4
TOP2B-204ENST00000435706 SERPINB3P29508 390 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 CTCFP49711 727 aaPredicted RBP23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L24Q0WX57 530 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 FAM98CQ17RN3 349 aaKnown RBP23.82■■□□□ 1.4
TOP2B-204ENST00000435706 USP17L6PQ6QN14 398 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 NCLNQ969V3 563 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 ZC4H2Q9NQZ6 224 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 CCND2P30279 289 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 RHPN2Q8IUC4 686 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 RBM15Q96T37 977 aaKnown RBP eCLIP23.82■■□□□ 1.4
TOP2B-204ENST00000435706 NCAPD2Q15021 1401 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 NEK2P51955 445 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 RBM43Q6ZSC3 357 aaKnown RBP23.82■■□□□ 1.4
TOP2B-204ENST00000435706 CDHR1Q96JP9 859 aa23.82■■□□□ 1.4
TOP2B-204ENST00000435706 SUPT3HO75486 399 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 KRT7P08729 469 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 RAPGEF5Q92565 580 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 GCOM2Q9BZD3 368 aaPredicted RBP23.81■■□□□ 1.4
TOP2B-204ENST00000435706 CTDNEP1O95476 244 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 SCTRP47872 440 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 C7orf25Q9BPX7 421 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 DHX36Q9H2U1 1008 aaKnown RBP23.81■■□□□ 1.4
TOP2B-204ENST00000435706 SEL1LQ9UBV2 794 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 MYO5CQ9NQX4 1742 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 VHLP40337 213 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 KLK7P49862 253 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 ROR1Q01973 937 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 ELOA2Q8IYF1 753 aaPredicted RBP23.81■■□□□ 1.4
TOP2B-204ENST00000435706 LRRC34Q8IZ02 419 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 C9orf72Q96LT7 481 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 ADAM33Q9BZ11 813 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 CELF4Q9BZC1 486 aaKnown RBP23.81■■□□□ 1.4
TOP2B-204ENST00000435706 SMARCA1P28370 1054 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 KIAA1586Q9HCI6 787 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 LZTS1Q9Y250 596 aa23.81■■□□□ 1.4
TOP2B-204ENST00000435706 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 ERVK-24P63145 666 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 TEKT4Q8WW24 435 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 DCP1AQ9NPI6 582 aaPredicted RBP23.8■■□□□ 1.4
TOP2B-204ENST00000435706 BSDC1Q9NW68 430 aaPredicted RBP23.8■■□□□ 1.4
TOP2B-204ENST00000435706 KLHL8Q9P2G9 620 aaPredicted RBP23.8■■□□□ 1.4
TOP2B-204ENST00000435706 PCSK1NQ9UHG2 260 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 ERBB3P21860 1342 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 SLC4A1P02730 911 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 SIX6OS1Q8N1H7 587 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 AKT3Q9Y243 479 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 ROBO2Q9HCK4 1378 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 ARHGDIAP52565 204 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 RSRC2Q7L4I2 434 aaKnown RBP23.8■■□□□ 1.4
TOP2B-204ENST00000435706 CASKIN2Q8WXE0 1202 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 MTBPQ96DY7 904 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 ERP44Q9BS26 406 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 POLR1AO95602 1720 aaPredicted RBP23.8■■□□□ 1.4
TOP2B-204ENST00000435706 UBE4BO95155 1302 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 EMSYQ7Z589 1322 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 PDXKO00764 312 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 PPP1R12AO14974 1030 aaPredicted RBP23.8■■□□□ 1.4
TOP2B-204ENST00000435706 ZBTB18Q99592 522 aa23.8■■□□□ 1.4
TOP2B-204ENST00000435706 NQO1P15559 274 aaKnown RBP23.79■■□□□ 1.4
TOP2B-204ENST00000435706 STAT3P40763 770 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 CYLC2Q14093 348 aaPredicted RBP23.79■■□□□ 1.4
TOP2B-204ENST00000435706 P3H1Q32P28 736 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 ZNF667Q5HYK9 610 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 HABP4Q5JVS0 413 aaKnown RBP23.79■■□□□ 1.4
TOP2B-204ENST00000435706 APLFQ8IW19 511 aaPredicted RBP23.79■■□□□ 1.4
TOP2B-204ENST00000435706 KIF9Q9HAQ2 790 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 SLC9A2Q9UBY0 812 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 CLDN3O15551 220 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 GNA15P30679 374 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 SLC1A1P43005 524 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 STK4Q13043 487 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 NCAPG2Q86XI2 1143 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 PSMC3IPQ9P2W1 217 aaPredicted RBP23.79■■□□□ 1.4
TOP2B-204ENST00000435706 PALM3A6NDB9 673 aaPredicted RBP23.79■■□□□ 1.4
TOP2B-204ENST00000435706 SLC16A4O15374 487 aa23.79■■□□□ 1.4
TOP2B-204ENST00000435706 ASAP2O43150 1006 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms