RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 HEXIM1O94992 359 aaKnown RBP18.07■□□□□ 0.48
LIMK1-203ENST00000435201 ABCB4P21439 1286 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 GPC3P51654 580 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 HADHBP55084 474 aaKnown RBP18.07■□□□□ 0.48
LIMK1-203ENST00000435201 MAP2K1Q02750 393 aaPredicted RBP18.07■□□□□ 0.48
LIMK1-203ENST00000435201 PPATQ06203 517 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 GPD1LQ8N335 351 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 RASGEF1CQ8N431 466 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 METTL13Q8N6R0 699 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 SCFD2Q8WU76 684 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 POMGNT1Q8WZA1 660 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 DIS3Q9Y2L1 958 aaKnown RBP18.07■□□□□ 0.48
LIMK1-203ENST00000435201 FAN1Q9Y2M0 1017 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 SNCAIPQ9Y6H5 919 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 PAPPA2Q9BXP8 1791 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 CCDC188H7C350 402 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 HNRNPDLO14979 420 aaKnown RBP18.07■□□□□ 0.48
LIMK1-203ENST00000435201 CLSTN1O94985 981 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 SP4Q02446 784 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 PAK2Q13177 524 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 VGLL4Q14135 290 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 TCEAL1Q15170 157 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 SLC39A4Q6P5W5 647 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 FAM71AQ8IYT1 594 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 ANKRD35Q8N283 1001 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 KCNN1Q92952 543 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 CCDC127Q96BQ5 260 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 GDAP1L1Q96MZ0 367 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 POLR3FQ9H1D9 316 aaPredicted RBP18.07■□□□□ 0.48
LIMK1-203ENST00000435201 OSGEPQ9NPF4 335 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 ARHGAP28Q9P2N2 729 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 PRDM4Q9UKN5 801 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 ADGRA3Q8IWK6 1321 aa18.07■□□□□ 0.48
LIMK1-203ENST00000435201 BUB1BO60566 1050 aaPredicted RBP18.06■□□□□ 0.48
LIMK1-203ENST00000435201 ATG7O95352 703 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 GLI1P08151 1106 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 SOX10P56693 466 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 MRPS25P82663 173 aaKnown RBP18.06■□□□□ 0.48
LIMK1-203ENST00000435201 CYP24A1Q07973 514 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 LBX2Q6XYB7 198 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.06■□□□□ 0.48
LIMK1-203ENST00000435201 FBXL13Q8NEE6 735 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 SLC20A1Q8WUM9 679 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 THAP2Q9H0W7 228 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 ISCUQ9H1K1 167 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 ZNF302Q9NR11 478 aa18.06■□□□□ 0.48
LIMK1-203ENST00000435201 NOC2LQ9Y3T9 749 aaKnown RBP18.06■□□□□ 0.48
LIMK1-203ENST00000435201 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
LIMK1-203ENST00000435201 GOLGA6BA6NDN3 693 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 SYF2O95926 243 aaKnown RBP18.05■□□□□ 0.48
LIMK1-203ENST00000435201 RNASE9P60153 205 aaKnown RBP18.05■□□□□ 0.48
LIMK1-203ENST00000435201 PRKG1Q13976 671 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 EMC2Q15006 297 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 MTERF2Q49AM1 385 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 PALB2Q86YC2 1186 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 RPUSD2Q8IZ73 545 aaKnown RBP18.05■□□□□ 0.48
LIMK1-203ENST00000435201 PPM1KQ8N3J5 372 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.05■□□□□ 0.48
LIMK1-203ENST00000435201 SHC3Q92529 594 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 ARHGEF26Q96DR7 871 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 BICD1Q96G01 975 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 NT5C1BQ96P26 610 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 HINFPQ9BQA5 517 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 KIAA1586Q9HCI6 787 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 EPB41L5Q9HCM4 733 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 TAS2R14Q9NYV8 317 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 TTC7AQ9ULT0 858 aaPredicted RBP18.05■□□□□ 0.48
LIMK1-203ENST00000435201 MAFBQ9Y5Q3 323 aaPredicted RBP18.05■□□□□ 0.48
LIMK1-203ENST00000435201 OTOFQ9HC10 1997 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 RTN2O75298 545 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 OATP04181 439 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 GZMAP12544 262 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 POLGP54098 1239 aaPredicted RBP18.05■□□□□ 0.48
LIMK1-203ENST00000435201 GUCY2DQ02846 1103 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 RIOX2Q8IUF8 465 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 EIF1ADQ8N9N8 165 aaKnown RBP18.05■□□□□ 0.48
LIMK1-203ENST00000435201 EPS8L1Q8TE68 723 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 SEMA4DQ92854 862 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 FAM81BQ96LP2 452 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 KREMEN1Q96MU8 473 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 TELO2Q9Y4R8 837 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 CSADQ9Y600 493 aa18.05■□□□□ 0.48
LIMK1-203ENST00000435201 SIP14410 1827 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 KIAA0391O15091 583 aaKnown RBP18.04■□□□□ 0.48
LIMK1-203ENST00000435201 RAD51CO43502 376 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 RNF40O75150 1001 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 USP8P40818 1118 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 ALDH5A1P51649 535 aaPredicted RBP18.04■□□□□ 0.48
LIMK1-203ENST00000435201 GYS2P54840 703 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 SP2Q02086 613 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 CLUL1Q15846 466 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 TREML2Q5T2D2 321 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 CYFIP1Q7L576 1253 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 KAT5Q92993 513 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 RAB20Q9NX57 234 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 NOCTQ9UK39 431 aaKnown RBP18.04■□□□□ 0.48
LIMK1-203ENST00000435201 SYNGAP1Q96PV0 1343 aa18.04■□□□□ 0.48
LIMK1-203ENST00000435201 ZC3H11AO75152 810 aaKnown RBP eCLIP18.03■□□□□ 0.48
LIMK1-203ENST00000435201 FTLP02792 175 aaPredicted RBP18.03■□□□□ 0.48
LIMK1-203ENST00000435201 GGCXP38435 758 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms