RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 ARF4P18085 180 aaPredicted RBP16.62■□□□□ 0.25
CDRT15-202ENST00000431716 TMEM132AQ24JP5 1023 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 TCTN1Q2MV58 587 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 ZC2HC1CQ53FD0 456 aaPredicted RBP16.62■□□□□ 0.25
CDRT15-202ENST00000431716 TWF2Q6IBS0 349 aaKnown RBP16.62■□□□□ 0.25
CDRT15-202ENST00000431716 ZPBP2Q6X784 338 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 SLC24A5Q71RS6 500 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 APBB1IPQ7Z5R6 666 aaPredicted RBP16.62■□□□□ 0.25
CDRT15-202ENST00000431716 ACCSQ96QU6 501 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 NUP62CLQ9H1M0 184 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 NKX2-4Q9H2Z4 354 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 TTYH1Q9H313 450 aaPredicted RBP16.62■□□□□ 0.25
CDRT15-202ENST00000431716 EXOC7Q9UPT5 735 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 PCDHA11Q9Y5I1 949 aa16.62■□□□□ 0.25
CDRT15-202ENST00000431716 N4BP3O15049 544 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 B4GALT5O43286 388 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 SKIP12755 728 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 SARSP49591 514 aaKnown RBP16.61■□□□□ 0.25
CDRT15-202ENST00000431716 WDR5P61964 334 aaKnown RBP16.61■□□□□ 0.25
CDRT15-202ENST00000431716 CAMK4Q16566 473 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 L1TD1Q5T7N2 865 aaKnown RBP16.61■□□□□ 0.25
CDRT15-202ENST00000431716 NT5DC1Q5TFE4 455 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 ATF7IP2Q5U623 682 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 RTN4RL1Q86UN2 441 aaPredicted RBP16.61■□□□□ 0.25
CDRT15-202ENST00000431716 MAP4K3Q8IVH8 894 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 HERC6Q8IVU3 1022 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 HPS3Q969F9 1004 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 GUCD1Q96NT3 240 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 CDX2Q99626 313 aaPredicted RBP16.61■□□□□ 0.25
CDRT15-202ENST00000431716 ACO2Q99798 780 aaKnown RBP16.61■□□□□ 0.25
CDRT15-202ENST00000431716 TMEM206Q9H813 350 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 SLC39A2Q9NP94 309 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 TNFSF13BQ9Y275 285 aa16.61■□□□□ 0.25
CDRT15-202ENST00000431716 MICAL3Q7RTP6 2002 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 A0A0U1RQF3 1178 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.6■□□□□ 0.25
CDRT15-202ENST00000431716 MGEA5O60502 916 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 KIF20AO95235 890 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 PIGRP01833 764 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 AMHP03971 560 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 MYBP10242 640 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 MYOGP15173 224 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 RAB27AP51159 221 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 CASP5P51878 434 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 FAM189BP81408 668 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 STK4Q13043 487 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 SLC27A1Q6PCB7 646 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 EPM2AIP1Q7L775 607 aaPredicted RBP16.6■□□□□ 0.25
CDRT15-202ENST00000431716 ZNF507Q8TCN5 953 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 BICD1Q96G01 975 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 CPB2Q96IY4 423 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 ADPGKQ9BRR6 497 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 TARS2Q9BW92 718 aaKnown RBP16.6■□□□□ 0.25
CDRT15-202ENST00000431716 KIAA1468Q9P260 1216 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 YBX2Q9Y2T7 364 aaKnown RBP16.6■□□□□ 0.25
CDRT15-202ENST00000431716 UBE4BO95155 1302 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 TTC3P53804 2025 aa16.6■□□□□ 0.25
CDRT15-202ENST00000431716 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 C9IYK1 514 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 HNRNPDLO14979 420 aaKnown RBP16.59■□□□□ 0.25
CDRT15-202ENST00000431716 TLL1O43897 1013 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 ZNF623O75123 536 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 TOM1L1O75674 476 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 LIG4P49917 911 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 GRIN2CQ14957 1233 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 BMT2Q1RMZ1 405 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 SYCP3Q8IZU3 236 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 LINC01599Q8WXQ3 324 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 ERCC4Q92889 916 aaPredicted RBP16.59■□□□□ 0.25
CDRT15-202ENST00000431716 TCHPQ9BT92 498 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 PDZD7Q9H5P4 517 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 ELAC1Q9H777 363 aaKnown RBP16.59■□□□□ 0.25
CDRT15-202ENST00000431716 PTPRHQ9HD43 1115 aa16.59■□□□□ 0.25
CDRT15-202ENST00000431716 SZT2Q5T011 3432 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 PRPF6O94906 941 aaKnown RBP16.58■□□□□ 0.24
CDRT15-202ENST00000431716 EOMESO95936 686 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 EDN1P05305 212 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 STAG3L1P0CL83 205 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 DEFB103AP81534 67 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 SKOR2Q2VWA4 1001 aaPredicted RBP16.58■□□□□ 0.24
CDRT15-202ENST00000431716 DCAF4L1Q3SXM0 396 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 UBXN11Q5T124 520 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 ZNF658Q5TYW1 1059 aaPredicted RBP16.58■□□□□ 0.24
CDRT15-202ENST00000431716 SLFN12LQ6IEE8 588 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDRT15-202ENST00000431716 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 MYOCDQ8IZQ8 938 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 TRIML1Q8N9V2 468 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 KIAA0895Q8NCT3 520 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 SCFD1Q8WVM8 642 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 MYLIPQ8WY64 445 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 FGFBP2Q9BYJ0 223 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 TRIM6Q9C030 488 aaPredicted RBP16.58■□□□□ 0.24
CDRT15-202ENST00000431716 FAM105AQ9NUU6 356 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 USP20Q9Y2K6 914 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 PCDHB7Q9Y5E2 793 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 PCDHB2Q9Y5E7 798 aa16.58■□□□□ 0.24
CDRT15-202ENST00000431716 CLDN3O15551 220 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms