RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SERPINB3P29508 390 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 GUCY1A2P33402 732 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 IL13P35225 146 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 SREBF1P36956 1147 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 ADCY8P40145 1251 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 HK3P52790 923 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 ATP8B2P98198 1209 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 CDC42EP1Q00587 391 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 MESP2Q0VG99 397 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 TARDBPQ13148 414 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 UBE3CQ15386 1083 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 LMBR1LQ6UX01 489 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 LARP4Q71RC2 724 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 FAM129CQ86XR2 697 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 CERS3Q8IU89 383 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 FBXO15Q8NCQ5 510 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 NUDT10Q8NFP7 164 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 MORC4Q8TE76 937 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 KAT5Q92993 513 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 GJA10Q969M2 543 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 ZBTB8AQ96BR9 441 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 NUDT11Q96G61 164 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 ATP6V0A4Q9HBG4 840 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 TRPS1Q9UHF7 1281 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 PHTF1Q9UMS5 762 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 STXBP5LQ9Y2K9 1186 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 COMMD10Q9Y6G5 202 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 C2orf78A6NCI8 922 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 AMY1AP04745 511 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 STAT5BP51692 787 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 SESN2P58004 480 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 PICALMQ13492 652 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 LONRF3Q496Y0 759 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 PPP4R3AQ6IN85 833 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 PPP4R4Q6NUP7 873 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 Q6ZUG5 572 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 MIGA2Q7L4E1 593 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 MAEAQ7L5Y9 396 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 OTOP2Q7RTS6 562 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 TTC7BQ86TV6 843 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 COL23A1Q86Y22 540 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 EXOC8Q8IYI6 725 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 WDR48Q8TAF3 677 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 KLHDC4Q8TBB5 520 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 IFI44Q8TCB0 444 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 LPPQ93052 612 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 GFM2Q969S9 779 aaKnown RBP4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 RGMAQ96B86 450 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 MBD6Q96DN6 1003 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 SIGLEC10Q96LC7 697 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 MPHOSPH6Q99547 160 aaKnown RBP4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 C22orf23Q9BZE7 217 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 ENKD1Q9H0I2 346 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 BCO1Q9HAY6 547 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 CALCOCO1Q9P1Z2 691 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 CROTQ9UKG9 612 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 PCDHA13Q9Y5I0 950 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 PMF1-BGLAPU3KQ54 211 aa4.01□□□□□ -1.77
HMGB1P27-201ENST00000431429 ARID4BQ4LE39 1312 aaPredicted RBP4□□□□□ -1.77
HMGB1P27-201ENST00000431429 CAPN8A6NHC0 703 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 NT5C1B-RDH14C9J2C7 533 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 GOLIM4O00461 696 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 WNT10BO00744 389 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 LDHAP00338 332 aaKnown RBP4□□□□□ -1.77
HMGB1P27-201ENST00000431429 CSF2RBP32927 897 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 CRHR1P34998 444 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 RAB1AP62820 205 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 TLE1Q04724 770 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 HGFACQ04756 655 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 NOGQ13253 232 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 NOMO1Q15155 1222 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 LLGL1Q15334 1064 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 CNN3Q15417 329 aaKnown RBP4□□□□□ -1.77
HMGB1P27-201ENST00000431429 MLANAQ16655 118 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 THEMIS2Q5TEJ8 643 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 TRMT10BQ6PF06 316 aaKnown RBP4□□□□□ -1.77
HMGB1P27-201ENST00000431429 ZGPATQ8N5A5 531 aaKnown RBP4□□□□□ -1.77
HMGB1P27-201ENST00000431429 CAMKK1Q8N5S9 505 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 OR7D4Q8NG98 312 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 ZNF480Q8WV37 535 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 ANKS1AQ92625 1134 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 CDK5RAP3Q96JB5 506 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 C7orf25Q9BPX7 421 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 ELAC2Q9BQ52 826 aaKnown RBP4□□□□□ -1.77
HMGB1P27-201ENST00000431429 MYH16Q9H6N6 1097 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 RSAD1Q9HA92 442 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 KMT5AQ9NQR1 393 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 TAGLN3Q9UI15 199 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 ADAM29Q9UKF5 820 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 CDC42EP3Q9UKI2 254 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 FAM50BQ9Y247 325 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 POLHQ9Y253 713 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 NR2E3Q9Y5X4 410 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 ATRNL1Q5VV63 1379 aa4□□□□□ -1.77
HMGB1P27-201ENST00000431429 KLRG2A4D1S0 409 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 LRRC10BA6NIK2 292 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 ETV2O00321 342 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 IFRD1O00458 451 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 AKR1B10O60218 316 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 GASTP01350 101 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms