RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CBWD1Q9BRT8 395 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 TSEN34Q9BSV6 310 aaKnown RBP19.92■□□□□ 0.78
HMGN1-206ENST00000431390 HSPBP1Q9NZL4 362 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 IMPACTQ9P2X3 320 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 ARMCX3Q9UH62 379 aaPredicted RBP19.92■□□□□ 0.78
HMGN1-206ENST00000431390 STYXL1Q9Y6J8 313 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 LTBP2Q14767 1821 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 TISP43B9A030 160 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 ANKRD63C9JTQ0 380 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 KIAA0391O15091 583 aaKnown RBP19.91■□□□□ 0.78
HMGN1-206ENST00000431390 EXOC3O60645 756 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 CYP2C9P11712 490 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 PBX1P40424 430 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 CASP4P49662 377 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 HIC1Q14526 733 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 NBPF20Q3BBV1 942 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 VWA3BQ502W6 1294 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 ZPBP2Q6X784 338 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 SESTD1Q86VW0 696 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 FAM186BQ8IYM0 893 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 ZNF710Q8N1W2 664 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 XXYLT1Q8NBI6 393 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 FZD8Q9H461 694 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 IFT122Q9HBG6 1241 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 A0A0C4DFX4 3053 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 MOXD2PA6NHM9 499 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 VTNP04004 478 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 PRKCBP05771 671 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 PTMAP06454 111 aaKnown RBP19.91■□□□□ 0.78
HMGN1-206ENST00000431390 ADSSP30520 456 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 GPC3P51654 580 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 UBXN1Q04323 297 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 SLFN12LQ6IEE8 588 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 TMC6Q7Z403 805 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 BORCS6Q96GS4 357 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 MRPL4Q9BYD3 311 aaKnown RBP19.91■□□□□ 0.78
HMGN1-206ENST00000431390 NDST4Q9H3R1 872 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 GTF2IRD1Q9UHL9 959 aa19.91■□□□□ 0.78
HMGN1-206ENST00000431390 ITIH6Q6UXX5 1313 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 A0A087WZ62 844 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 A0A1W2PQC6 194 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 TREHO43280 583 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 MBTD1Q05BQ5 628 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 HSP90AA2PQ14568 343 aaPredicted RBP19.9■□□□□ 0.78
HMGN1-206ENST00000431390 FAM187BQ17R55 369 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 FKBP15Q5T1M5 1219 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 SPECC1LQ69YQ0 1117 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 POMGNT1Q8WZA1 660 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 FDXACB1Q9BRP7 624 aaPredicted RBP19.9■□□□□ 0.78
HMGN1-206ENST00000431390 PCIF1Q9H4Z3 704 aa19.9■□□□□ 0.78
HMGN1-206ENST00000431390 PRMT7Q9NVM4 692 aaPredicted RBP19.9■□□□□ 0.78
HMGN1-206ENST00000431390 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.9■□□□□ 0.78
HMGN1-206ENST00000431390 PES1O00541 588 aaKnown RBP19.89■□□□□ 0.77
HMGN1-206ENST00000431390 ACKR2O00590 384 aa19.89■□□□□ 0.77
HMGN1-206ENST00000431390 NLRP11P59045 1033 aaKnown RBP19.89■□□□□ 0.77
HMGN1-206ENST00000431390 TAF2Q6P1X5 1199 aa19.89■□□□□ 0.77
HMGN1-206ENST00000431390 RUFY4Q6ZNE9 571 aa19.89■□□□□ 0.77
HMGN1-206ENST00000431390 SRGAP1Q7Z6B7 1085 aa19.89■□□□□ 0.77
HMGN1-206ENST00000431390 NME8Q8N427 588 aa19.89■□□□□ 0.77
HMGN1-206ENST00000431390 PPP1R13LQ8WUF5 828 aa19.89■□□□□ 0.77
HMGN1-206ENST00000431390 PRIMPOLQ96LW4 560 aa19.89■□□□□ 0.77
HMGN1-206ENST00000431390 FBXL18Q96ME1 805 aa19.89■□□□□ 0.77
HMGN1-206ENST00000431390 TARS2Q9BW92 718 aaKnown RBP19.89■□□□□ 0.77
HMGN1-206ENST00000431390 SENP6Q9GZR1 1112 aaPredicted RBP19.89■□□□□ 0.77
HMGN1-206ENST00000431390 DNAH12Q6ZR08 3092 aa19.88■□□□□ 0.77
HMGN1-206ENST00000431390 INO80B-WBP1J3KQ70 363 aa19.88■□□□□ 0.77
HMGN1-206ENST00000431390 MYCNP04198 464 aaPredicted RBP19.88■□□□□ 0.77
HMGN1-206ENST00000431390 EDN1P05305 212 aa19.88■□□□□ 0.77
HMGN1-206ENST00000431390 ACLYP53396 1101 aa19.88■□□□□ 0.77
HMGN1-206ENST00000431390 INTS8Q75QN2 995 aaKnown RBP19.88■□□□□ 0.77
HMGN1-206ENST00000431390 ARRDC4Q8NCT1 418 aa19.88■□□□□ 0.77
HMGN1-206ENST00000431390 NLRP7Q8WX94 980 aa19.88■□□□□ 0.77
HMGN1-206ENST00000431390 INO80BQ9C086 356 aaPredicted RBP19.88■□□□□ 0.77
HMGN1-206ENST00000431390 FAM49AQ9H0Q0 323 aaPredicted RBP19.88■□□□□ 0.77
HMGN1-206ENST00000431390 KIAA1586Q9HCI6 787 aa19.88■□□□□ 0.77
HMGN1-206ENST00000431390 TOM1L1O75674 476 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 RPLP2P05387 115 aaKnown RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 MCCD1P59942 119 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 ZNF200P98182 395 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 PTPN11Q06124 597 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 HS1BP3Q53T59 392 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 GPD1LQ8N335 351 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 TRIM44Q96DX7 344 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 ZNF668Q96K58 619 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 ERGIC2Q96RQ1 377 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 ACO2Q99798 780 aaKnown RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 ADAMTS10Q9H324 1103 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 MINDY3Q9H8M7 445 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 GPR32O75388 356 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 LDHAP00338 332 aaKnown RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 KRT13P13646 458 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 GSDMDP57764 484 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 ENPEPQ07075 957 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 PRPF4BQ13523 1007 aaKnown RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 GDF6Q6KF10 455 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 TSHZ1Q6ZSZ6 1077 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 DNAJB3Q8WWF6 145 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 SCLT1Q96NL6 688 aa19.87■□□□□ 0.77
HMGN1-206ENST00000431390 GCOM2Q9BZD3 368 aaPredicted RBP19.87■□□□□ 0.77
HMGN1-206ENST00000431390 UNC80Q8N2C7 3258 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms