RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 SLC39A14Q15043 492 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 KARSQ15046 597 aaKnown RBP16.81■□□□□ 0.28
PTCD1-204ENST00000430982 ECHDC2Q86YB7 292 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 ZBTB8OSQ8IWT0 167 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 SPPL3Q8TCT6 385 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 BSNDQ8WZ55 320 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 PPP2R3CQ969Q6 453 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 PHF7Q9BWX1 381 aaPredicted RBP16.81■□□□□ 0.28
PTCD1-204ENST00000430982 ELAC1Q9H777 363 aaKnown RBP16.81■□□□□ 0.28
PTCD1-204ENST00000430982 AGPAT5Q9NUQ2 364 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 TMEM161AQ9NX61 479 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
PTCD1-204ENST00000430982 USP15Q9Y4E8 981 aaPredicted RBP16.81■□□□□ 0.28
PTCD1-204ENST00000430982 TBKBP1A7MCY6 615 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 PLA2G4BP0C869 781 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 FGFR1P11362 822 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 ATF7P17544 494 aaPredicted RBP16.8■□□□□ 0.28
PTCD1-204ENST00000430982 PLCG1P19174 1290 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 MBTD1Q05BQ5 628 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 RINT1Q6NUQ1 792 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
PTCD1-204ENST00000430982 CMTR2Q8IYT2 770 aaKnown RBP16.8■□□□□ 0.28
PTCD1-204ENST00000430982 KCTD17Q8N5Z5 321 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 KRI1Q8N9T8 703 aaKnown RBP16.8■□□□□ 0.28
PTCD1-204ENST00000430982 LINC00301Q8NCQ3 95 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 DEPTORQ8TB45 409 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 SUSD6Q92537 303 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 KIFAP3Q92845 792 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 EPSTI1Q96J88 318 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 IFT74Q96LB3 600 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 MRPL42Q9Y6G3 142 aaKnown RBP16.8■□□□□ 0.28
PTCD1-204ENST00000430982 CACNA1AO00555 2505 aa16.8■□□□□ 0.28
PTCD1-204ENST00000430982 PTPRZ1P23471 2315 aaPredicted RBP16.79■□□□□ 0.28
PTCD1-204ENST00000430982 A0A0U1RQF3 1178 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 SPTLC2O15270 562 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 TSPAN1O60635 241 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 HIP1RO75146 1068 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 LIG1P18858 919 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 TXLNAP40222 546 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 NCBP1Q09161 790 aaKnown RBP16.79■□□□□ 0.28
PTCD1-204ENST00000430982 RAD51AP2Q09MP3 1159 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 DHX8Q14562 1220 aaKnown RBP16.79■□□□□ 0.28
PTCD1-204ENST00000430982 PPP2R5AQ15172 486 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 C1orf186Q6ZWK4 172 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 USP49Q70CQ1 688 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 SYT2Q8N9I0 419 aaPredicted RBP16.79■□□□□ 0.28
PTCD1-204ENST00000430982 NFKBIZQ9BYH8 718 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 CCSER1Q9C0I3 900 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
PTCD1-204ENST00000430982 VPS13AQ96RL7 3174 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 PLXNA4Q9HCM2 1894 aa16.79■□□□□ 0.28
PTCD1-204ENST00000430982 RIF1Q5UIP0 2472 aaKnown RBP16.79■□□□□ 0.28
PTCD1-204ENST00000430982 HOXA2O43364 376 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 SKIP12755 728 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 NAMPTP43490 491 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 SLC12A3P55017 1021 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 PCBP1Q15365 356 aaKnown RBP eCLIP16.78■□□□□ 0.28
PTCD1-204ENST00000430982 LONRF3Q496Y0 759 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 CDCA2Q69YH5 1023 aaPredicted RBP16.78■□□□□ 0.28
PTCD1-204ENST00000430982 ABI1Q8IZP0 508 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 CPB2Q96IY4 423 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 DRC1Q96MC2 740 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 KIFC3Q9BVG8 833 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 C2orf40Q9H1Z8 148 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 FAM105AQ9NUU6 356 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 MORC2Q9Y6X9 1032 aaPredicted RBP16.78■□□□□ 0.28
PTCD1-204ENST00000430982 FAM186AA6NE01 2351 aa16.78■□□□□ 0.28
PTCD1-204ENST00000430982 CCDC169A6NNP5 214 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 YEATS4O95619 227 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 BRD1O95696 1058 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 AXLP30530 894 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 HOXA11P31270 313 aaPredicted RBP16.77■□□□□ 0.28
PTCD1-204ENST00000430982 NRIP1P48552 1158 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 RAB27AP51159 221 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 MCM6Q14566 821 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 AMHR2Q16671 573 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 PTPN21Q16825 1174 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 TMEM132AQ24JP5 1023 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 SPOUT1Q5T280 376 aaKnown RBP16.77■□□□□ 0.28
PTCD1-204ENST00000430982 NOTUMQ6P988 496 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 ZNF598Q86UK7 904 aaKnown RBP16.77■□□□□ 0.28
PTCD1-204ENST00000430982 GPBP1Q86WP2 473 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 LRRC15Q8TF66 581 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 POF1BQ8WVV4 589 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 RAD54LQ92698 747 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 ATOH1Q92858 354 aaPredicted RBP16.77■□□□□ 0.28
PTCD1-204ENST00000430982 LPPQ93052 612 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 TIPINQ9BVW5 301 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 TMEM117Q9H0C3 514 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 BLOC1S4Q9NUP1 217 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 RNF19AQ9NV58 838 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 PRMT7Q9NVM4 692 aaPredicted RBP16.77■□□□□ 0.28
PTCD1-204ENST00000430982 PCDHB2Q9Y5E7 798 aa16.77■□□□□ 0.28
PTCD1-204ENST00000430982 NPHP3-ACAD11A0A0J9YXS1 232 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 B4GALT5O43286 388 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 CSPG5O95196 566 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 EOMESO95936 686 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 PRKCBP05771 671 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms