RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ZHX1Q9UKY1 873 aaPredicted RBP15.54■□□□□ 0.08
CALD1-207ENST00000430085 ZNF236Q9UL36 1845 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 ZNF263O14978 683 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 KIAA0391O15091 583 aaKnown RBP15.53■□□□□ 0.08
CALD1-207ENST00000430085 ECM2O94769 699 aaPredicted RBP15.53■□□□□ 0.08
CALD1-207ENST00000430085 TBC1D8O95759 1140 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 RFX1P22670 979 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 MATR3P43243 847 aaKnown RBP eCLIP15.53■□□□□ 0.08
CALD1-207ENST00000430085 MXI1P50539 228 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 EFNA5P52803 228 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 JAM2P57087 298 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 ACVR2BQ13705 512 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 SLFN12LQ6IEE8 588 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 GJB7Q6PEY0 223 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 LRRC71Q8N4P6 559 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 NPLOC4Q8TAT6 608 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 TMC2Q8TDI7 906 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 AFG1LQ8WV93 481 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 FAM213AQ9BRX8 229 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.53■□□□□ 0.08
CALD1-207ENST00000430085 LUC7LQ9NQ29 371 aaKnown RBP15.53■□□□□ 0.08
CALD1-207ENST00000430085 WBP1LQ9NX94 342 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 TRIM10Q9UDY6 481 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 IGKV6-21A0A0C4DH24 114 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.53■□□□□ 0.08
CALD1-207ENST00000430085 ZNF233A6NK53 670 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 CA12O43570 354 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 SLU7O95391 586 aaKnown RBP15.53■□□□□ 0.08
CALD1-207ENST00000430085 PIGRP01833 764 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 STAT1P42224 750 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 GFPT1Q06210 699 aaPredicted RBP15.53■□□□□ 0.08
CALD1-207ENST00000430085 CYP24A1Q07973 514 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 LAMTOR4Q0VGL1 99 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 ASTE1Q2TB18 679 aaPredicted RBP15.53■□□□□ 0.08
CALD1-207ENST00000430085 C1orf220Q5T0J3 134 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 FMNL3Q8IVF7 1028 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 ZBTB8OSQ8IWT0 167 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 SLC35F6Q8N357 371 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 PLEKHO2Q8TD55 490 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 PARD3BQ8TEW8 1205 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 MFSD14AQ96MC6 490 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 STK33Q9BYT3 514 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 SUCLA2Q9P2R7 463 aaPredicted RBP15.53■□□□□ 0.08
CALD1-207ENST00000430085 DNAJC12Q9UKB3 198 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 AJAP1Q9UKB5 411 aaPredicted RBP15.53■□□□□ 0.08
CALD1-207ENST00000430085 TFR2Q9UP52 801 aa15.53■□□□□ 0.08
CALD1-207ENST00000430085 SIP14410 1827 aa15.52■□□□□ 0.08
CALD1-207ENST00000430085 CTAGE9A4FU28 777 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 EXTL3O43909 919 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 SRGAP2CP0DJJ0 459 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 FERP16591 822 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 MAGEA1P43355 309 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 MAP2K5Q13163 448 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 DUSP28Q4G0W2 176 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 ZNF484Q5JVG2 852 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 MORN1Q5T089 497 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 IQSEC1Q6DN90 963 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 IRF2BP2Q7Z5L9 587 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 METTL13Q8N6R0 699 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 TRAPPC12Q8WVT3 735 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 BEGAINQ9BUH8 593 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 TMEM117Q9H0C3 514 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 C2orf40Q9H1Z8 148 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 RNPEPQ9H4A4 650 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 ZFYVE28Q9HCC9 887 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 TSKSQ9UJT2 592 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 AGO2Q9UKV8 859 aaKnown RBP15.52■□□□□ 0.07
CALD1-207ENST00000430085 ZNF215Q9UL58 517 aaPredicted RBP15.52■□□□□ 0.07
CALD1-207ENST00000430085 STYXL1Q9Y6J8 313 aa15.52■□□□□ 0.07
CALD1-207ENST00000430085 RCCD1A6NED2 376 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 RBAK-RBAKDNI3L0D1 243 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 PMM2O15305 246 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 PPFIA4O75335 1185 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 SMPD1P17405 629 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 MCCD1P59942 119 aaPredicted RBP15.51■□□□□ 0.07
CALD1-207ENST00000430085 IGBP1P78318 339 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 ENPEPQ07075 957 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
CALD1-207ENST00000430085 TFDP1Q14186 410 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 SLC18A3Q16572 532 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 EPC2Q52LR7 807 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 KRT39Q6A163 491 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 EFCAB12Q6NXP0 572 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 VPS36Q86VN1 386 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 RNF149Q8NC42 400 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 OR6J1Q8NGC5 347 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 TARS2Q9BW92 718 aaKnown RBP15.51■□□□□ 0.07
CALD1-207ENST00000430085 LACRTQ9GZZ8 138 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 TMEM8AQ9HCN3 771 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 ANKFY1Q9P2R3 1169 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 USP20Q9Y2K6 914 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 LRRIQ3A6PVS8 624 aaPredicted RBP15.51■□□□□ 0.07
CALD1-207ENST00000430085 F8VZ95 297 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 CTIFO43310 598 aaKnown RBP15.51■□□□□ 0.07
CALD1-207ENST00000430085 LDHAP00338 332 aaKnown RBP15.51■□□□□ 0.07
CALD1-207ENST00000430085 CCDC172P0C7W6 258 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 ZNF286BP0CG31 522 aa15.51■□□□□ 0.07
CALD1-207ENST00000430085 DLATP10515 647 aaKnown RBP15.51■□□□□ 0.07
CALD1-207ENST00000430085 GTF2H1P32780 548 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms