RNA–Protein interactions for RNA: ENST00000429907.5

RPE-205, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-205ENST00000429907 PPME1Q9Y570 386 aa8.7□□□□□ -1.02
RPE-205ENST00000429907 BDP1A6H8Y1 2624 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 VWA3AA6NCI4 1184 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 K7ELQ4 463 aaPredicted RBP8.69□□□□□ -1.02
RPE-205ENST00000429907 ASAP2O43150 1006 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 LYPLA2O95372 231 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 SSBP05455 408 aaKnown RBP eCLIP8.69□□□□□ -1.02
RPE-205ENST00000429907 ITGB1P05556 798 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 HSP90AA1P07900 732 aaKnown RBP8.69□□□□□ -1.02
RPE-205ENST00000429907 LINC00271P0C7V0 271 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 POU3F3P20264 500 aaPredicted RBP8.69□□□□□ -1.02
RPE-205ENST00000429907 RPA1P27694 616 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 CA8P35219 290 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 CAPSQ13938 189 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 MXD4Q14582 209 aaPredicted RBP8.69□□□□□ -1.02
RPE-205ENST00000429907 TIGD5Q53EQ6 642 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 TCEAL5Q5H9L2 206 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 KRT79Q5XKE5 535 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 RNF19BQ6ZMZ0 732 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 SRGAP1Q7Z6B7 1085 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 SCUBE3Q8IX30 993 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 CRIPAKQ8N1N5 446 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 C4orf32Q8N8J7 132 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 KLHL23Q8NBE8 558 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
RPE-205ENST00000429907 CPB2Q96IY4 423 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 PLIN2Q99541 437 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 APOL6Q9BWW8 343 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 GBP3Q9H0R5 595 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 IGFLR1Q9H665 355 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 ELAC1Q9H777 363 aaKnown RBP8.69□□□□□ -1.02
RPE-205ENST00000429907 POLD4Q9HCU8 107 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 C11orf16Q9NQ32 467 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.69□□□□□ -1.02
RPE-205ENST00000429907 AAASQ9NRG9 546 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 AGPAT5Q9NUQ2 364 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 TYW1Q9NV66 732 aaKnown RBP8.69□□□□□ -1.02
RPE-205ENST00000429907 LMCD1Q9NZU5 365 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 PCDHB12Q9Y5F1 795 aa8.69□□□□□ -1.02
RPE-205ENST00000429907 ZNF638Q14966 1978 aaKnown RBP8.69□□□□□ -1.02
RPE-205ENST00000429907 DENND4AQ7Z401 1863 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 MYH10P35580 1976 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 A0A0U1RQF3 1178 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 MEIS3P2A8K0S8 358 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 E9PMD0 336 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 C5orf67F2Z3F1 127 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 LAD1O00515 517 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 SPTLC1O15269 473 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 ZC3H11AO75152 810 aaKnown RBP eCLIP8.68□□□□□ -1.02
RPE-205ENST00000429907 RB1P06400 928 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 SKIP12755 728 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 ATF7P17544 494 aaPredicted RBP8.68□□□□□ -1.02
RPE-205ENST00000429907 KCNA5P22460 613 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 GLRA2P23416 452 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 ATP2C1P98194 919 aaPredicted RBP8.68□□□□□ -1.02
RPE-205ENST00000429907 CEBPZQ03701 1054 aaKnown RBP8.68□□□□□ -1.02
RPE-205ENST00000429907 RNASELQ05823 741 aaKnown RBP8.68□□□□□ -1.02
RPE-205ENST00000429907 NCBP1Q09161 790 aaKnown RBP8.68□□□□□ -1.02
RPE-205ENST00000429907 CUL4AQ13619 759 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 IL17AQ16552 155 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 ECM1Q16610 540 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 CSPP1Q1MSJ5 1256 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 CLLU1OSQ5K130 101 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 CDR2LQ86X02 465 aaPredicted RBP8.68□□□□□ -1.02
RPE-205ENST00000429907 LRRC43Q8N309 656 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 COLGALT1Q8NBJ5 622 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 MCPH1Q8NEM0 835 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 RASSF8Q8NHQ8 419 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 MICAL1Q8TDZ2 1067 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 POF1BQ8WVV4 589 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 CDK5RAP3Q96JB5 506 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 CASD1Q96PB1 797 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 PLVAPQ9BX97 442 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 TRIM6Q9C030 488 aaPredicted RBP8.68□□□□□ -1.02
RPE-205ENST00000429907 TMEM117Q9H0C3 514 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 BHMT2Q9H2M3 363 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 NSUN3Q9H649 340 aaKnown RBP8.68□□□□□ -1.02
RPE-205ENST00000429907 IL21Q9HBE4 155 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 CHST12Q9NRB3 414 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 FAM105AQ9NUU6 356 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 RNF19AQ9NV58 838 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 DBR1Q9UK59 544 aaKnown RBP8.68□□□□□ -1.02
RPE-205ENST00000429907 PLAGL2Q9UPG8 496 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 PCDHGC5Q9Y5F6 944 aa8.68□□□□□ -1.02
RPE-205ENST00000429907 NT5C1B-RDH14C9J2C7 533 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 B4GALT5O43286 388 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 TSPAN1O60635 241 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 FGF18O76093 207 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 EOMESO95936 686 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 XRCC6P12956 609 aaKnown RBP eCLIP8.67□□□□□ -1.02
RPE-205ENST00000429907 IL9P15248 144 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 LAG3P18627 525 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 PDCP20941 246 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 DNAJB1P25685 340 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 IRS1P35568 1242 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 ARL2P36404 184 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 PRPHP41219 470 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 RAB27AP51159 221 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 PTENP60484 403 aa8.67□□□□□ -1.02
RPE-205ENST00000429907 FAM189BP81408 668 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms