RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 LEO1Q8WVC0 666 aaPredicted RBP19.21■□□□□ 0.67
CTSD-203ENST00000429746 NXF3Q9H4D5 531 aaKnown RBP19.21■□□□□ 0.67
CTSD-203ENST00000429746 TMEM134Q9H6X4 195 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 PTPRHQ9HD43 1115 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 ODF2LQ9ULJ1 636 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 PHLPP2Q6ZVD8 1323 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 TRIP11Q15643 1979 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 TDRD15B5MCY1 1934 aaKnown RBP19.2■□□□□ 0.66
CTSD-203ENST00000429746 MYMKA6NI61 221 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 GRM6O15303 877 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 SLC16A4O15374 487 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 ITGB1P05556 798 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 RB1P06400 928 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 MAPTP10636 758 aaKnown RBP19.2■□□□□ 0.66
CTSD-203ENST00000429746 CTNNB1P35222 781 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 EFNA5P52803 228 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 DHX8Q14562 1220 aaKnown RBP19.2■□□□□ 0.66
CTSD-203ENST00000429746 SKIV2LQ15477 1246 aaKnown RBP19.2■□□□□ 0.66
CTSD-203ENST00000429746 MAPK6Q16659 721 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 RESP18Q5W5W9 173 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 SLC27A1Q6PCB7 646 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 KCNG4Q8TDN1 519 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 P2RX5Q93086 422 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 IFT74Q96LB3 600 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 PANK2Q9BZ23 570 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 CXCL16Q9H2A7 254 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 RNF216Q9NWF9 866 aaPredicted RBP19.2■□□□□ 0.66
CTSD-203ENST00000429746 RWDD3Q9Y3V2 267 aa19.2■□□□□ 0.66
CTSD-203ENST00000429746 TCF20Q9UGU0 1960 aaKnown RBP19.2■□□□□ 0.66
CTSD-203ENST00000429746 HOXA2O43364 376 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 SKIP12755 728 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 PROZP22891 400 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 DMP1Q13316 513 aaPredicted RBP19.19■□□□□ 0.66
CTSD-203ENST00000429746 GPM6BQ13491 265 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 PTPROQ16827 1216 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 RRAGBQ5VZM2 374 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 COLGALT1Q8NBJ5 622 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 PLVAPQ9BX97 442 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 KMT5AQ9NQR1 393 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 TBC1D13Q9NVG8 400 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 MIOSQ9NXC5 875 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 PLAGL2Q9UPG8 496 aa19.19■□□□□ 0.66
CTSD-203ENST00000429746 FRMD3A2A2Y4 597 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 CCDC169A6NNP5 214 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 MEFVO15553 781 aaPredicted RBP19.18■□□□□ 0.66
CTSD-203ENST00000429746 NPTXRO95502 500 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 PBX3P40426 434 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 PRPF4BQ13523 1007 aaKnown RBP19.18■□□□□ 0.66
CTSD-203ENST00000429746 TMEM173Q86WV6 379 aaPredicted RBP19.18■□□□□ 0.66
CTSD-203ENST00000429746 LRRC43Q8N309 656 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 PDILTQ8N807 584 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 KLHL23Q8NBE8 558 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 SPPL3Q8TCT6 385 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 HLA-CQ95604 372 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 ACO2Q99798 780 aaKnown RBP19.18■□□□□ 0.66
CTSD-203ENST00000429746 STRA6Q9BX79 667 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 HAPLN2Q9GZV7 340 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 KBTBD4Q9NVX7 518 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 CCDC39Q9UFE4 941 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 CFAP45Q9UL16 551 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 BDP1A6H8Y1 2624 aa19.18■□□□□ 0.66
CTSD-203ENST00000429746 K7ERI5 159 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 TNFRSF10AO00220 468 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 DDHD2O94830 711 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 BMP1P13497 986 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 NOMO2Q5JPE7 1267 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 CCDC73Q6ZRK6 1079 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 ZNF280BQ86YH2 543 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 BCL7CQ8WUZ0 217 aaPredicted RBP19.17■□□□□ 0.66
CTSD-203ENST00000429746 DDX12PQ92771 950 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 MRPL38Q96DV4 380 aaKnown RBP19.17■□□□□ 0.66
CTSD-203ENST00000429746 ZFP42Q96MM3 310 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 TARS2Q9BW92 718 aaKnown RBP19.17■□□□□ 0.66
CTSD-203ENST00000429746 NRDE2Q9H7Z3 1164 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 RSAD1Q9HA92 442 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 ALG13Q9NP73 1137 aaKnown RBP19.17■□□□□ 0.66
CTSD-203ENST00000429746 TNFSF13BQ9Y275 285 aa19.17■□□□□ 0.66
CTSD-203ENST00000429746 RBM19Q9Y4C8 960 aaKnown RBP19.17■□□□□ 0.66
CTSD-203ENST00000429746 PDCD11Q14690 1871 aaKnown RBP19.16■□□□□ 0.66
CTSD-203ENST00000429746 FAM237AA0A1B0GTK4 181 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 PPP1R37O75864 691 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 STAT6P42226 847 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 CEP120Q8N960 986 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 CNNM3Q8NE01 707 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 RASSF8Q8NHQ8 419 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 ADAMTS19Q8TE59 1207 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 PGBD4Q96DM1 585 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 C11orf84Q9BUA3 381 aaPredicted RBP19.16■□□□□ 0.66
CTSD-203ENST00000429746 FGFBP2Q9BYJ0 223 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 CDT1Q9H211 546 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 PARVGQ9HBI0 331 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 DNAJB4Q9UDY4 337 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 HPSEQ9Y251 543 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 ZMYM2Q9UBW7 1377 aa19.16■□□□□ 0.66
CTSD-203ENST00000429746 ARL5CA6NH57 179 aa19.15■□□□□ 0.66
CTSD-203ENST00000429746 N4BP3O15049 544 aa19.15■□□□□ 0.66
CTSD-203ENST00000429746 ITGA4P13612 1032 aa19.15■□□□□ 0.66
CTSD-203ENST00000429746 LIG1P18858 919 aa19.15■□□□□ 0.66
CTSD-203ENST00000429746 AKAP5P24588 427 aa19.15■□□□□ 0.66
CTSD-203ENST00000429746 IRS1P35568 1242 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms