RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 FAM89AQ96GI7 184 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 THUMPD2Q9BTF0 503 aaKnown RBP7.91□□□□□ -1.14
PTPRK-211ENST00000429595 COA1Q9GZY4 146 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 TTYH1Q9H313 450 aaPredicted RBP7.91□□□□□ -1.14
PTPRK-211ENST00000429595 LRRC37AA6NMS7 1700 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 ZSWIM8A7E2V4 1837 aa7.9□□□□□ -1.14
PTPRK-211ENST00000429595 NOP56O00567 594 aaKnown RBP7.9□□□□□ -1.14
PTPRK-211ENST00000429595 AKAP8O43823 692 aaKnown RBP7.9□□□□□ -1.14
PTPRK-211ENST00000429595 EIF2S2P20042 333 aaKnown RBP7.9□□□□□ -1.14
PTPRK-211ENST00000429595 ZXDAP98168 799 aa7.9□□□□□ -1.14
PTPRK-211ENST00000429595 COPS6Q7L5N1 327 aa7.9□□□□□ -1.14
PTPRK-211ENST00000429595 ANKRD23Q86SG2 305 aa7.9□□□□□ -1.14
PTPRK-211ENST00000429595 ZC3H18Q86VM9 953 aaKnown RBP7.9□□□□□ -1.14
PTPRK-211ENST00000429595 USP38Q8NB14 1042 aa7.9□□□□□ -1.14
PTPRK-211ENST00000429595 ZBED3Q96IU2 234 aaPredicted RBP7.9□□□□□ -1.14
PTPRK-211ENST00000429595 X6R8D5 127 aa7.9□□□□□ -1.14
PTPRK-211ENST00000429595 CENPFP49454 3210 aa7.9□□□□□ -1.14
PTPRK-211ENST00000429595 LAMB1P07942 1786 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 SSC5DA1L4H1 1573 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 HTATSF1O43719 755 aaKnown RBP7.89□□□□□ -1.15
PTPRK-211ENST00000429595 PRKAR2BP31323 418 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 RPL11P62913 178 aaKnown RBP7.89□□□□□ -1.15
PTPRK-211ENST00000429595 RBM10P98175 930 aaKnown RBP7.89□□□□□ -1.15
PTPRK-211ENST00000429595 DCTN1Q14203 1278 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 SHHQ15465 462 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 CFAP100Q494V2 611 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 MROH9Q5TGP6 573 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 ANKRD18AQ8IVF6 992 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 ZBTB38Q8NAP3 1195 aaPredicted RBP7.89□□□□□ -1.15
PTPRK-211ENST00000429595 PPP1R14AQ96A00 147 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 SEC16BQ96JE7 1060 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 PARK7Q99497 189 aaKnown RBP7.89□□□□□ -1.15
PTPRK-211ENST00000429595 TIMM13Q9Y5L4 95 aaPredicted RBP7.89□□□□□ -1.15
PTPRK-211ENST00000429595 LAMB2P55268 1798 aa7.89□□□□□ -1.15
PTPRK-211ENST00000429595 ZNF28P17035 718 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 BCL6P41182 706 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 PPIL2Q13356 520 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 NCAPHQ15003 741 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 AAK1Q2M2I8 961 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 CCDC152Q4G0S7 254 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 CEP68Q76N32 757 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 LIMS2Q7Z4I7 341 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 KREMEN2Q8NCW0 462 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 ANAPC16Q96DE5 110 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 HOOK2Q96ED9 719 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 PHACTR3Q96KR7 559 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 EPHX3Q9H6B9 360 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 ALPK3Q96L96 1907 aa7.88□□□□□ -1.15
PTPRK-211ENST00000429595 MED23Q9ULK4 1368 aa7.87□□□□□ -1.15
PTPRK-211ENST00000429595 B4GALT3O60512 393 aa7.87□□□□□ -1.15
PTPRK-211ENST00000429595 HMGCRP04035 888 aa7.87□□□□□ -1.15
PTPRK-211ENST00000429595 NAT2P11245 290 aa7.87□□□□□ -1.15
PTPRK-211ENST00000429595 EIF4A1P60842 406 aaKnown RBP7.87□□□□□ -1.15
PTPRK-211ENST00000429595 E4F1Q66K89 784 aaPredicted RBP7.87□□□□□ -1.15
PTPRK-211ENST00000429595 BORAQ6PGQ7 559 aa7.87□□□□□ -1.15
PTPRK-211ENST00000429595 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.87□□□□□ -1.15
PTPRK-211ENST00000429595 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.87□□□□□ -1.15
PTPRK-211ENST00000429595 DIO2Q92813 273 aa7.87□□□□□ -1.15
PTPRK-211ENST00000429595 PRMT6Q96LA8 375 aaPredicted RBP7.87□□□□□ -1.15
PTPRK-211ENST00000429595 ST6GALNAC2Q9UJ37 374 aa7.87□□□□□ -1.15
PTPRK-211ENST00000429595 SPTBN5Q9NRC6 3674 aaKnown RBP7.87□□□□□ -1.15
PTPRK-211ENST00000429595 CACNA1AO00555 2505 aa7.87□□□□□ -1.15
PTPRK-211ENST00000429595 COL2A1P02458 1487 aaPredicted RBP7.87□□□□□ -1.15
PTPRK-211ENST00000429595 SMIM22K7EJ46 135 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 PPATQ06203 517 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 SF1Q15637 639 aaKnown RBP7.86□□□□□ -1.15
PTPRK-211ENST00000429595 LRRC26Q2I0M4 334 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 AKNAD1Q5T1N1 836 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 IQCEQ6IPM2 695 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 ZNF227Q86WZ6 799 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 MBD6Q96DN6 1003 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 TRMT2BQ96GJ1 504 aaKnown RBP7.86□□□□□ -1.15
PTPRK-211ENST00000429595 ZSWIM3Q96MP5 696 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 WRNIP1Q96S55 665 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 ACBD3Q9H3P7 528 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 OGDHLQ9ULD0 1010 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 LAMA3Q16787 3333 aa7.86□□□□□ -1.15
PTPRK-211ENST00000429595 PSME4Q14997 1843 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 TCP10L2B9ZVM9 353 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 ANXA1P04083 346 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 SCG5P05408 212 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 ITGAVP06756 1048 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 U2AF1L5P0DN76 240 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-211ENST00000429595 KCNJ4P48050 445 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 CCT4P50991 539 aaKnown RBP7.85□□□□□ -1.15
PTPRK-211ENST00000429595 U2AF1Q01081 240 aaKnown RBP eCLIP7.85□□□□□ -1.15
PTPRK-211ENST00000429595 PRSS53Q2L4Q9 553 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 C9orf50Q5SZB4 431 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 C6orf15Q6UXA7 325 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-211ENST00000429595 FAM124AQ86V42 546 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 ARRDC4Q8NCT1 418 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 RCBTB1Q8NDN9 531 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 SMCR8Q8TEV9 937 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-211ENST00000429595 ZKSCAN4Q969J2 545 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-211ENST00000429595 LCORQ96JN0 433 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-211ENST00000429595 UIMC1Q96RL1 719 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 CDC5LQ99459 802 aaKnown RBP7.85□□□□□ -1.15
PTPRK-211ENST00000429595 SENP6Q9GZR1 1112 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-211ENST00000429595 PPP4R1LQ9P1A2 415 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 STRIP2Q9ULQ0 834 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms