RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 HMBSP08397 361 aa18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 U2AF2P26368 475 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 FAM102AQ5T9C2 384 aaPredicted RBP18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 TLK2Q86UE8 772 aa18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 RPA1P27694 616 aa18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 DRAP1Q14919 205 aaPredicted RBP18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 SETDB1Q15047 1291 aa18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 KRT222Q8N1A0 295 aa18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 ENTPD7Q9NQZ7 604 aa18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 ASNSD1Q9NWL6 643 aa18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 NR2E3Q9Y5X4 410 aa18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 SYNGAP1Q96PV0 1343 aa18.28■□□□□ 0.52
SMARCA4-203ENST00000429416 MOCS3O95396 460 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 CNTN2Q02246 1040 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 FMR1NBQ8N0W7 255 aaPredicted RBP18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 FAM76AQ8TAV0 307 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 ANKEF1Q9NU02 776 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 PITPNM2Q9BZ72 1349 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 EIF3CLB5ME19 914 aaKnown RBP18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 PDE1BQ01064 536 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 ZNF484Q5JVG2 852 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 FYB2Q5VWT5 728 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 CYP4F22Q6NT55 531 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 DCLK2Q8N568 766 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 EIF3CQ99613 913 aaKnown RBP18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 I3L4J1 428 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 KIAA0391O15091 583 aaKnown RBP18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 ZC3H11AO75152 810 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 CALB1P05937 261 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 RAPH1Q70E73 1250 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 MCUQ8NE86 351 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 RDM1Q8NG50 284 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 CLMNQ96JQ2 1002 aa18.27■□□□□ 0.52
SMARCA4-203ENST00000429416 CXCR5P32302 372 aa18.27■□□□□ 0.51
SMARCA4-203ENST00000429416 CATSPER3Q86XQ3 398 aa18.27■□□□□ 0.51
SMARCA4-203ENST00000429416 TJP2Q9UDY2 1190 aa18.27■□□□□ 0.51
SMARCA4-203ENST00000429416 HEY1Q9Y5J3 304 aa18.27■□□□□ 0.51
SMARCA4-203ENST00000429416 SOWAHDA6NJG2 315 aa18.27■□□□□ 0.51
SMARCA4-203ENST00000429416 SNRNP35Q16560 246 aaKnown RBP18.27■□□□□ 0.51
SMARCA4-203ENST00000429416 MTG1Q9BT17 334 aaPredicted RBP18.27■□□□□ 0.51
SMARCA4-203ENST00000429416 SLC37A4O43826 429 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 CYBBP04839 570 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 DNERQ8NFT8 737 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 PDXKO00764 312 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 THOC5Q13769 683 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 NCOA4Q13772 614 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 RUFY4Q6ZNE9 571 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 RASGRP2Q7LDG7 609 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 FAM163AQ96GL9 167 aaPredicted RBP18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 B3GAT3O94766 335 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 CPP00450 1065 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 MTMR3Q13615 1198 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 SLC30A10Q6XR72 485 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 PRPF31Q8WWY3 499 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 TSC1Q92574 1164 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 IGSF9BQ9UPX0 1349 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 NKRFO15226 690 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 ATP11AP98196 1134 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 TRIP13Q15645 432 aaPredicted RBP18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 BBOF1Q8ND07 529 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 MGARPQ8TDB4 240 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 NMRK2Q9NPI5 230 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 KCND2Q9NZV8 630 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 LSM7Q9UK45 103 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 ZNF541Q9H0D2 1346 aa18.26■□□□□ 0.51
SMARCA4-203ENST00000429416 KPNA6O60684 536 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 ALDH1A3P47895 512 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 ACVR2BQ13705 512 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 METTL7BQ6UX53 244 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 ANKRD42Q8N9B4 389 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 TAF1DQ9H5J8 278 aaPredicted RBP18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 MED1Q15648 1581 aaPredicted RBP18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 SKIP12755 728 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 WHAMMP3Q1A5X7 153 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 SLC35F6Q8N357 371 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 COLEC11Q9BWP8 271 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 CEP72Q9P209 647 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 PCDHA13Q9Y5I0 950 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 S100BP04271 92 aaPredicted RBP18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 BZW1Q7L1Q6 419 aaKnown RBP18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 RPGRIP1Q96KN7 1286 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 MYMKA6NI61 221 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 PMLP29590 882 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 RGS7P49802 495 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 DCP1BQ8IZD4 617 aaKnown RBP18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 ANGPTL3Q9Y5C1 460 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 LGALS16A8MUM7 142 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 BEX3Q00994 111 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 SF3A3Q12874 501 aaKnown RBP eCLIP18.25■□□□□ 0.513e-6■■■■■ 28.1
SMARCA4-203ENST00000429416 RPS6KA2Q15349 733 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 SEZ6Q53EL9 994 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 CROCCP2Q86T23 111 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 OSMRQ99650 979 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 GPRC5CQ9NQ84 441 aa18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 KLHL8Q9P2G9 620 aaPredicted RBP18.25■□□□□ 0.51
SMARCA4-203ENST00000429416 TCRBV5S4A2TA0A5A2 114 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 EFCAB8A8MWE9 144 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 LRG1P02750 347 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 IRF1P10914 325 aa18.24■□□□□ 0.51
SMARCA4-203ENST00000429416 CTNNA1P35221 906 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms