RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 IFNLR1Q8IU57 520 aaPredicted RBP18.97■□□□□ 0.63
TRIM39-209ENST00000428728 CNNM3Q8NE01 707 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 CCDC51Q96ER9 411 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 MFSD14AQ96MC6 490 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 GAD1Q99259 594 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 TMEM175Q9BSA9 504 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 TRIM6Q9C030 488 aaPredicted RBP18.97■□□□□ 0.63
TRIM39-209ENST00000428728 CSRNP2Q9H175 543 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 RNF39Q9H2S5 420 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 ADAM7Q9H2U9 754 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 NXF3Q9H4D5 531 aaKnown RBP18.97■□□□□ 0.63
TRIM39-209ENST00000428728 GPRC5CQ9NQ84 441 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 DZANK1Q9NVP4 752 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 NR2E1Q9Y466 385 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 IRAK3Q9Y616 596 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 TRIOO75962 3097 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 LRRIQ4A6NIV6 560 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 NRP1O14786 923 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 B4GALT5O43286 388 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 MED24O75448 989 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 SPATA31C1P0DKV0 1188 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
TRIM39-209ENST00000428728 OR1G1P47890 313 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 SCNN1GP51170 649 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 PCBP1Q15365 356 aaKnown RBP eCLIP18.96■□□□□ 0.63
TRIM39-209ENST00000428728 AMHR2Q16671 573 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 PTPN21Q16825 1174 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 POTEGQ6S5H5 508 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 PBXIP1Q96AQ6 731 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 RIPOR3Q96MK2 946 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 ZFP42Q96MM3 310 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 NECTIN4Q96NY8 510 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 UBN1Q9NPG3 1134 aa18.96■□□□□ 0.63
TRIM39-209ENST00000428728 MYH11P35749 1972 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 ARL5CA6NH57 179 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 C2CD4DB7Z1M9 353 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 C2CD2LO14523 706 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 NPTXRO95502 500 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 ALDH2P05091 517 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 MTHFRP42898 656 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 POU5F1BQ06416 359 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 SIGLEC14Q08ET2 396 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 GNL2Q13823 731 aaKnown RBP18.95■□□□□ 0.62
TRIM39-209ENST00000428728 ZNF174Q15697 407 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 CABP7Q86V35 215 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 CATSPER3Q86XQ3 398 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 FEZF2Q8TBJ5 459 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 SLC22A17Q8WUG5 538 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 FBXL18Q96ME1 805 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 EMILIN2Q9BXX0 1053 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 TUFT1Q9NNX1 390 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 MARCH5Q9NX47 278 aa18.95■□□□□ 0.62
TRIM39-209ENST00000428728 URODP06132 367 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 OR52Z1P0C646 297 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 KLRC2P26717 231 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 KIAA1841Q6NSI8 718 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 TMC5Q6UXY8 1006 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 SUGP1Q8IWZ8 645 aaKnown RBP18.94■□□□□ 0.62
TRIM39-209ENST00000428728 COLGALT2Q8IYK4 626 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 HACE1Q8IYU2 909 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 KLHL5Q96PQ7 755 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 LLPHQ9BRT6 129 aaKnown RBP18.94■□□□□ 0.62
TRIM39-209ENST00000428728 NFKBIZQ9BYH8 718 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 MRPL17Q9NRX2 175 aaKnown RBP18.94■□□□□ 0.62
TRIM39-209ENST00000428728 MIOSQ9NXC5 875 aa18.94■□□□□ 0.62
TRIM39-209ENST00000428728 F8W810 466 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 CNPP09543 421 aaKnown RBP18.93■□□□□ 0.62
TRIM39-209ENST00000428728 AKAP5P24588 427 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 TTC38Q5R3I4 469 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 SLC27A1Q6PCB7 646 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 BMP8AQ7Z5Y6 402 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 PPFIBP1Q86W92 1011 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 TDRD5Q8NAT2 981 aaKnown RBP18.93■□□□□ 0.62
TRIM39-209ENST00000428728 FAM184AQ8NB25 1140 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 MCPH1Q8NEM0 835 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 ERMNQ8TAM6 284 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 HERC2P3Q9BVR0 1158 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 FOXP1Q9H334 677 aaPredicted RBP18.93■□□□□ 0.62
TRIM39-209ENST00000428728 SFXN1Q9H9B4 322 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 KLK14Q9P0G3 267 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 STK39Q9UEW8 545 aa18.93■□□□□ 0.62
TRIM39-209ENST00000428728 DBR1Q9UK59 544 aaKnown RBP18.93■□□□□ 0.62
TRIM39-209ENST00000428728 ARHGEF35A5YM69 484 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 INPPL1O15357 1258 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 SOD2P04179 222 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 XRCC6P12956 609 aaKnown RBP eCLIP18.92■□□□□ 0.62
TRIM39-209ENST00000428728 CLCN4P51793 760 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 HMGN5P82970 282 aaKnown RBP18.92■□□□□ 0.62
TRIM39-209ENST00000428728 DSC1Q08554 894 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 NBR1Q14596 966 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 ZBTB8OSQ8IWT0 167 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 KREMEN2Q8NCW0 462 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 NACC1Q96RE7 527 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 POLR3CQ9BUI4 534 aaPredicted RBP18.92■□□□□ 0.62
TRIM39-209ENST00000428728 KCNH6Q9H252 994 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 GIT1Q9Y2X7 761 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 VWA8A3KMH1 1905 aa18.92■□□□□ 0.62
TRIM39-209ENST00000428728 LIG1P18858 919 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 NHLH1Q02575 133 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 ORC2Q13416 577 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms