RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 EDIL3O43854 480 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 FAM86B2P0C5J1 330 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 SP9P0CG40 484 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 SMIM10L2AP0DMW4 78 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 SMIM10L2BP0DMW5 78 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 ZNF165P49910 485 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 NDUFA8P51970 172 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 ARHGAP4P98171 946 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 ITGB3BPQ13352 177 aaPredicted RBP9.67□□□□□ -0.86
HDAC1-202ENST00000428704 IQCB1Q15051 598 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 NPY5RQ15761 445 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 ANO6Q4KMQ2 910 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 CEP55Q53EZ4 464 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 SPOUT1Q5T280 376 aaKnown RBP9.67□□□□□ -0.86
HDAC1-202ENST00000428704 SARM1Q6SZW1 724 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.67□□□□□ -0.86
HDAC1-202ENST00000428704 ZDHHC14Q8IZN3 488 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 RASGRP4Q8TDF6 673 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 CDHR1Q96JP9 859 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 GLT8D2Q9H1C3 349 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 TUT1Q9H6E5 874 aaKnown RBP9.67□□□□□ -0.86
HDAC1-202ENST00000428704 EHMT1Q9H9B1 1298 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 KCNH7Q9NS40 1196 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 A0A1B0GVL5 298 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 MEIS1O00470 390 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 MAFGO15525 162 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 CYP3A4P08684 503 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 GNAT1P11488 350 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 PFKFB1P16118 471 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 MSNP26038 577 aaKnown RBP9.66□□□□□ -0.86
HDAC1-202ENST00000428704 TCF7P36402 384 aaPredicted RBP9.66□□□□□ -0.86
HDAC1-202ENST00000428704 MTHFRP42898 656 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 TRAPPC10P48553 1259 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 ERVFC1P60507 584 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 ADAM17P78536 824 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 ITIH3Q06033 890 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 PPM1JQ5JR12 505 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 FAM26DQ5JW98 314 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 PLPP4Q5VZY2 271 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 GALNT17Q6IS24 598 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 PDE12Q6L8Q7 609 aaKnown RBP9.66□□□□□ -0.86
HDAC1-202ENST00000428704 SHC4Q6S5L8 630 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 REXO1Q8N1G1 1221 aaKnown RBP9.66□□□□□ -0.86
HDAC1-202ENST00000428704 SUMF1Q8NBK3 374 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 GIMAP8Q8ND71 665 aaPredicted RBP9.66□□□□□ -0.86
HDAC1-202ENST00000428704 TNFRSF25Q93038 417 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 SECISBP2LQ93073 1101 aaKnown RBP9.66□□□□□ -0.86
HDAC1-202ENST00000428704 LENG9Q96B70 501 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 PCYT2Q99447 389 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 SDF4Q9BRK5 362 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 NAT10Q9H0A0 1025 aaKnown RBP9.66□□□□□ -0.86
HDAC1-202ENST00000428704 ADAM7Q9H2U9 754 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 KDM4CQ9H3R0 1056 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 RNPEPQ9H4A4 650 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 AGO4Q9HCK5 861 aaKnown RBP9.66□□□□□ -0.86
HDAC1-202ENST00000428704 C6orf50Q9HD87 102 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 TUBE1Q9UJT0 475 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 PCDHB12Q9Y5F1 795 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 SRPRBQ9Y5M8 271 aaKnown RBP9.66□□□□□ -0.86
HDAC1-202ENST00000428704 GPR179Q6PRD1 2367 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 LOXHD1Q8IVV2 1947 aa9.66□□□□□ -0.86
HDAC1-202ENST00000428704 NFASCO94856 1347 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 MYH9P35579 1960 aaKnown RBP9.65□□□□□ -0.86
HDAC1-202ENST00000428704 M0R2N6 131 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 AP5Z1O43299 807 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 CCNE2O96020 404 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 STAG3L1P0CL83 205 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 CDC25BP30305 580 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 KRT2P35908 639 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 SYKP43405 635 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 TBC1D8BQ0IIM8 1120 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 TDGQ13569 410 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 KCNC3Q14003 757 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 SPECC1Q5M775 1068 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 UTP14CQ5TAP6 766 aaKnown RBP9.65□□□□□ -0.86
HDAC1-202ENST00000428704 NIPA1Q7RTP0 329 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 NPAS4Q8IUM7 802 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 THNSL1Q8IYQ7 743 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 CCDC148Q8NFR7 591 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 CCDC12Q8WUD4 166 aaPredicted RBP9.65□□□□□ -0.86
HDAC1-202ENST00000428704 LMBR1Q8WVP7 490 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 CASP10Q92851 521 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 BRMS1Q9HCU9 246 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 JPH1Q9HDC5 661 aaPredicted RBP9.65□□□□□ -0.86
HDAC1-202ENST00000428704 AAASQ9NRG9 546 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 SLC9A2Q9UBY0 812 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 FBXO2Q9UK22 296 aaPredicted RBP9.65□□□□□ -0.86
HDAC1-202ENST00000428704 DBR1Q9UK59 544 aaKnown RBP9.65□□□□□ -0.86
HDAC1-202ENST00000428704 USP18Q9UMW8 372 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 KCNJ14Q9UNX9 436 aa9.65□□□□□ -0.86
HDAC1-202ENST00000428704 GOLGA6L6A8MZA4 724 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 FSCN2O14926 492 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 DHX15O43143 795 aaKnown RBP9.64□□□□□ -0.87
HDAC1-202ENST00000428704 FGF18O76093 207 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 WEE2P0C1S8 567 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 MARCKSP29966 332 aaPredicted RBP9.64□□□□□ -0.87
HDAC1-202ENST00000428704 GNA11P29992 359 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 NLRP12P59046 1061 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 ACTR2P61160 394 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 LPIN1Q14693 890 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms