RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 PLS3P13797 630 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 CASP1P29466 404 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 RAB27AP51159 221 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 NDUFA8P51970 172 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 PPP2R5AQ15172 486 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 CLLU1OSQ5K130 101 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 FSIP1Q8NA03 581 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 IQUBQ8NA54 791 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 KLHL23Q8NBE8 558 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 MRPL38Q96DV4 380 aaKnown RBP17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 CASD1Q96PB1 797 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 FZD8Q9H461 694 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 KBTBD4Q9NVX7 518 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 SERTAD1Q9UHV2 236 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 ODF2LQ9ULJ1 636 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 PCDHB2Q9Y5E7 798 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 PCDHB12Q9Y5F1 795 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 ARF4P18085 180 aaPredicted RBP17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 ZNF131P52739 623 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 DMP1Q13316 513 aaPredicted RBP17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 NOTUMQ6P988 496 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 ZNF598Q86UK7 904 aaKnown RBP17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 THNSL1Q8IYQ7 743 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 GRAMD1CQ8IYS0 662 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 LRRC43Q8N309 656 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 PGBD4Q96DM1 585 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 PLVAPQ9BX97 442 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 ZHX3Q9H4I2 956 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 KMT5AQ9NQR1 393 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 ARHGAP28Q9P2N2 729 aa17.27■□□□□ 0.36
CLK3P2-201ENST00000427566 TRANK1O15050 2925 aa17.27■□□□□ 0.35
CLK3P2-201ENST00000427566 EYSQ5T1H1 3165 aa17.27■□□□□ 0.35
CLK3P2-201ENST00000427566 TCF20Q9UGU0 1960 aaKnown RBP17.27■□□□□ 0.35
CLK3P2-201ENST00000427566 A0A1W2PQ27 194 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 A0A1W2PQ64 194 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 A0A1W2PQD8 194 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 MEIS3P2A8K0S8 358 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 ACTN4O43707 911 aaKnown RBP17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 FAM13AO94988 1023 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 PRKCBP05771 671 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 AXLP30530 894 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 UBXN11Q5T124 520 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 LRRC55Q6ZSA7 311 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 MYCT1Q8N699 235 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 COLGALT1Q8NBJ5 622 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 FIZ1Q96SL8 496 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 NTPCRQ9BSD7 190 aaKnown RBP17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 APOL6Q9BWW8 343 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 EIF2AQ9BY44 585 aaKnown RBP17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 TRIM6Q9C030 488 aaPredicted RBP17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 C2orf40Q9H1Z8 148 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 CWH43Q9H720 699 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 C17orf75Q9HAS0 396 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 THEGQ9P2T0 379 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 PLAGL2Q9UPG8 496 aa17.26■□□□□ 0.35
CLK3P2-201ENST00000427566 FAM237AA0A1B0GTK4 181 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 GADD45BO75293 160 aaPredicted RBP17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 ITGB1P05556 798 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 LAG3P18627 525 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 AFMP43652 599 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 PCBP1Q15365 356 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 FAM187BQ17R55 369 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 GLB1LQ6UWU2 654 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 EP400NLQ6ZTU2 488 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 SPIRE2Q8WWL2 714 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 MRPS27Q92552 414 aaKnown RBP17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 P2RX5Q93086 422 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 TRAIPQ9BWF2 469 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 BLZF1Q9H2G9 400 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 TNMDQ9H2S6 317 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 CUEDC2Q9H467 287 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 PARVGQ9HBI0 331 aa17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 PRMT7Q9NVM4 692 aaPredicted RBP17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 LARSQ9P2J5 1176 aaKnown RBP17.25■□□□□ 0.35
CLK3P2-201ENST00000427566 K7ERI5 159 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 TBCAO75347 108 aaKnown RBP17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 NPTXRO95502 500 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 ITGA4P13612 1032 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 IDEP14735 1019 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 NMT1P30419 496 aaKnown RBP17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 PBX3P40426 434 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 SYKP43405 635 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 NCKAP1LP55160 1127 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 RNASELQ05823 741 aaKnown RBP17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 MAPK6Q16659 721 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 TIGD5Q53EQ6 642 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 NT5DC1Q5TFE4 455 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 SFR1Q86XK3 245 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 POF1BQ8WVV4 589 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 MRPL9Q9BYD2 267 aaKnown RBP17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 TRIM9Q9C026 710 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 GBP3Q9H0R5 595 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 LMAN2LQ9H0V9 348 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 TBC1D7Q9P0N9 293 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 MYO7AQ13402 2215 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 ACKR2O00590 384 aa17.24■□□□□ 0.35
CLK3P2-201ENST00000427566 ZNF623O75123 536 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms