RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 STRN3Q13033 797 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 ZBTB33Q86T24 672 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 SPIRE2Q8WWL2 714 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 TNMDQ9H2S6 317 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 NXF3Q9H4D5 531 aaKnown RBP13.78□□□□□ -0.2
SMIM12-203ENST00000426886 PANK4Q9NVE7 773 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 IPPQ9Y573 584 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 AXLP30530 894 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 ZNF131P52739 623 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 AMPD3Q01432 767 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 PCBP1Q15365 356 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMIM12-203ENST00000426886 ATF7IP2Q5U623 682 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 ZNF689Q96CS4 500 aaPredicted RBP13.78□□□□□ -0.2
SMIM12-203ENST00000426886 BICD1Q96G01 975 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 ZBTB45Q96K62 511 aaPredicted RBP13.78□□□□□ -0.2
SMIM12-203ENST00000426886 PDZD7Q9H5P4 517 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 MRPL44Q9H9J2 332 aaKnown RBP13.78□□□□□ -0.2
SMIM12-203ENST00000426886 HPSEQ9Y251 543 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 PTPRSQ13332 1948 aa13.78□□□□□ -0.2
SMIM12-203ENST00000426886 SPTBN5Q9NRC6 3674 aaKnown RBP13.78□□□□□ -0.2
SMIM12-203ENST00000426886 ACTN4O43707 911 aaKnown RBP13.77□□□□□ -0.2
SMIM12-203ENST00000426886 GADD45BO75293 160 aaPredicted RBP13.77□□□□□ -0.2
SMIM12-203ENST00000426886 SLFN14P0C7P3 912 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 MAPTP10636 758 aaKnown RBP13.77□□□□□ -0.2
SMIM12-203ENST00000426886 OSTNP61366 133 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 CUL4BQ13620 913 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 CLLU1OSQ5K130 101 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 SLC27A1Q6PCB7 646 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 ZNF598Q86UK7 904 aaKnown RBP13.77□□□□□ -0.2
SMIM12-203ENST00000426886 SMG8Q8ND04 991 aaKnown RBP13.77□□□□□ -0.2
SMIM12-203ENST00000426886 IKZF4Q9H2S9 585 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 CUEDC2Q9H467 287 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 TYW1Q9NV66 732 aaKnown RBP13.77□□□□□ -0.2
SMIM12-203ENST00000426886 KLK14Q9P0G3 267 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 CNTNAP2Q9UHC6 1331 aa13.77□□□□□ -0.2
SMIM12-203ENST00000426886 A0A1W2PQ27 194 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 A0A1W2PQ64 194 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 A0A1W2PQD8 194 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 EOMESO95936 686 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 PBX3P40426 434 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 MATR3P43243 847 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMIM12-203ENST00000426886 FAM187BQ17R55 369 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 AGMOQ6ZNB7 445 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 PAGE5Q96GU1 130 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 MRPL4Q9BYD3 311 aaKnown RBP13.77□□□□□ -0.21
SMIM12-203ENST00000426886 FGFBP2Q9BYJ0 223 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 GBP3Q9H0R5 595 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 TMEM134Q9H6X4 195 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 ELAC1Q9H777 363 aaKnown RBP13.77□□□□□ -0.21
SMIM12-203ENST00000426886 ANKFY1Q9P2R3 1169 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 PARP2Q9UGN5 583 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 MRPL42Q9Y6G3 142 aaKnown RBP13.77□□□□□ -0.21
SMIM12-203ENST00000426886 EPOPA6NHQ4 379 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 TULP1O00294 542 aaPredicted RBP13.77□□□□□ -0.21
SMIM12-203ENST00000426886 ZNF202O95125 648 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 ITGA4P13612 1032 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 NCKAP1LP55160 1127 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 CNNM3Q8NE01 707 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 CASD1Q96PB1 797 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 FIZ1Q96SL8 496 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 ACO2Q99798 780 aaKnown RBP13.77□□□□□ -0.21
SMIM12-203ENST00000426886 ADPGKQ9BRR6 497 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 RC3H2Q9HBD1 1191 aaKnown RBP13.77□□□□□ -0.21
SMIM12-203ENST00000426886 GDAQ9Y2T3 454 aa13.77□□□□□ -0.21
SMIM12-203ENST00000426886 PHLPP2Q6ZVD8 1323 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 ZNF623O75123 536 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 GCNT3O95395 438 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 SKIP12755 728 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 RAB27AP51159 221 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 KCNA1Q09470 495 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 SEZ6Q53EL9 994 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 ZNF720Q7Z2F6 126 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 CCDC65Q8IXS2 484 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 GLIS3Q8NEA6 775 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 TGS1Q96RS0 853 aaKnown RBP13.76□□□□□ -0.21
SMIM12-203ENST00000426886 TRAIPQ9BWF2 469 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 LRRC27Q9C0I9 530 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 SNTG2Q9NY99 539 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 KCNG1Q9UIX4 513 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 TBX20Q9UMR3 447 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 GBF1Q92538 1859 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 POMCP01189 267 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 IGFBP4P22692 258 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 CASP5P51878 434 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 ZNF568Q3ZCX4 644 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 GLB1LQ6UWU2 654 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 CEP120Q8N960 986 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
SMIM12-203ENST00000426886 MYLIPQ8WY64 445 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 PGBD4Q96DM1 585 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 ZFP42Q96MM3 310 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 GAD1Q99259 594 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 PYM1Q9BRP8 204 aaKnown RBP13.76□□□□□ -0.21
SMIM12-203ENST00000426886 RSAD1Q9HA92 442 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 MTMR10Q9NXD2 777 aa13.76□□□□□ -0.21
SMIM12-203ENST00000426886 TRANK1O15050 2925 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms