RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 TREHO43280 583 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 GYPCP04921 128 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 VAMP7P51809 220 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 ADAM17P78536 824 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 LRMPQ12912 555 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 PRPF4BQ13523 1007 aaKnown RBP16.47■□□□□ 0.23
GINS3-203ENST00000426538 CCDC155Q8N6L0 562 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 KCNF1Q9H3M0 494 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 PRMT7Q9NVM4 692 aaPredicted RBP16.47■□□□□ 0.23
GINS3-203ENST00000426538 ANKFY1Q9P2R3 1169 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 PTCH2Q9Y6C5 1203 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 CENPFP49454 3210 aa16.47■□□□□ 0.23
GINS3-203ENST00000426538 ZNF233A6NK53 670 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 EXTL3O43909 919 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 TOM1L1O75674 476 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 CST5P28325 142 aaPredicted RBP16.46■□□□□ 0.23
GINS3-203ENST00000426538 GPC3P51654 580 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 MBTD1Q05BQ5 628 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 NBPF20Q3BBV1 942 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 IFNLR1Q8IU57 520 aaPredicted RBP16.46■□□□□ 0.23
GINS3-203ENST00000426538 TC2NQ8N9U0 490 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 ZSWIM2Q8NEG5 633 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 ZNF397Q8NF99 534 aaPredicted RBP16.46■□□□□ 0.23
GINS3-203ENST00000426538 VTI1AQ96AJ9 217 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 ZBTB45Q96K62 511 aaPredicted RBP16.46■□□□□ 0.23
GINS3-203ENST00000426538 FBXL18Q96ME1 805 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 ACO2Q99798 780 aaKnown RBP16.46■□□□□ 0.23
GINS3-203ENST00000426538 FAM213AQ9BRX8 229 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 MSTO1Q9BUK6 570 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 SIK3Q9Y2K2 1263 aa16.46■□□□□ 0.23
GINS3-203ENST00000426538 LUC7L2Q9Y383 392 aaKnown RBP16.46■□□□□ 0.23
GINS3-203ENST00000426538 SKILP12757 684 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 KLK7P49862 253 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 C1QTNF8P60827 252 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 GOLGA8FQ08AF8 430 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 GOLGA8DPQ0D2H9 430 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 EXOC3L4Q17RC7 722 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
GINS3-203ENST00000426538 FAM47CQ5HY64 1035 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 FIGNQ5HY92 759 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 SRGAP1Q7Z6B7 1085 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 CBWD2Q8IUF1 395 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 CCDC112Q8NEF3 446 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 NEK11Q8NG66 645 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 DNAJB3Q8WWF6 145 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 CRACR2AQ9BSW2 395 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 MINDY3Q9H8M7 445 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 WBP1LQ9NX94 342 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 CAPN11Q9UMQ6 739 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 GINS2Q9Y248 185 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 A0A0B4J269 797 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 TTC26A0AVF1 554 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 MFAP3LO75121 409 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 EDN1P05305 212 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 KRT9P35527 623 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.22
GINS3-203ENST00000426538 ZNF200P98182 395 aaPredicted RBP16.45■□□□□ 0.22
GINS3-203ENST00000426538 KCNMA1Q12791 1236 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 CETN1Q12798 172 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 FAM187BQ17R55 369 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 KIZQ2M2Z5 673 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 ATF7IP2Q5U623 682 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 GBP6Q6ZN66 633 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 TSHZ1Q6ZSZ6 1077 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 NME8Q8N427 588 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 CCDC51Q96ER9 411 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 PRIMPOLQ96LW4 560 aa16.45■□□□□ 0.22
GINS3-203ENST00000426538 GCOM2Q9BZD3 368 aaPredicted RBP16.45■□□□□ 0.22
GINS3-203ENST00000426538 FAM207AQ9NSI2 230 aaPredicted RBP16.45■□□□□ 0.22
GINS3-203ENST00000426538 SIP14410 1827 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 GTPBP10A4D1E9 387 aaKnown RBP16.44■□□□□ 0.22
GINS3-203ENST00000426538 ESPNB1AK53 854 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 STX10O60499 249 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 CABYRO75952 493 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 ERLIN2O94905 339 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 ADRB2P07550 413 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 TRIM49P0CI25 452 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 TRIM49CP0CI26 452 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 FMO5P49326 533 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 NCBP1Q09161 790 aaKnown RBP16.44■□□□□ 0.22
GINS3-203ENST00000426538 TMEM62Q0P6H9 643 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 HIC1Q14526 733 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 CCSAPQ6IQ19 270 aaPredicted RBP16.44■□□□□ 0.22
GINS3-203ENST00000426538 TAF2Q6P1X5 1199 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 RUFY4Q6ZNE9 571 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 ZNF710Q8N1W2 664 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 MFSD14AQ96MC6 490 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 PANX2Q96RD6 677 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 GTF2IRD1Q9UHL9 959 aa16.44■□□□□ 0.22
GINS3-203ENST00000426538 TTLL13PA6NNM8 815 aa16.43■□□□□ 0.22
GINS3-203ENST00000426538 N4BP1O75113 896 aaKnown RBP16.43■□□□□ 0.22
GINS3-203ENST00000426538 CSDE1O75534 798 aaKnown RBP16.43■□□□□ 0.22
GINS3-203ENST00000426538 IQCF3P0C7M6 154 aa16.43■□□□□ 0.22
GINS3-203ENST00000426538 HARSP12081 509 aaKnown RBP16.43■□□□□ 0.22
GINS3-203ENST00000426538 HOXC8P31273 242 aa16.43■□□□□ 0.22
GINS3-203ENST00000426538 ACOT2P49753 483 aa16.43■□□□□ 0.22
GINS3-203ENST00000426538 DLG4P78352 724 aa16.43■□□□□ 0.22
GINS3-203ENST00000426538 CYP24A1Q07973 514 aa16.43■□□□□ 0.22
GINS3-203ENST00000426538 MPZL3Q6UWV2 235 aa16.43■□□□□ 0.22
GINS3-203ENST00000426538 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms