RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 RBM19Q9Y4C8 960 aaKnown RBP20.38■□□□□ 0.85
MSH5-207ENST00000425703 HIP1RO75146 1068 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 ZC3H11AO75152 810 aaKnown RBP eCLIP20.37■□□□□ 0.85
MSH5-207ENST00000425703 PLA2G4BP0C869 781 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 PBX3P40426 434 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 NPTX2P47972 431 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 SLC12A3P55017 1021 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 ERVFC1P60507 584 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 MAPK7Q13164 816 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 EFHBQ8N7U6 833 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 TMEM169Q96HH4 297 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 CDCA3Q99618 268 aaPredicted RBP20.37■□□□□ 0.85
MSH5-207ENST00000425703 NTPCRQ9BSD7 190 aaKnown RBP20.37■□□□□ 0.85
MSH5-207ENST00000425703 RNF39Q9H2S5 420 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 CLDND1Q9NY35 253 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 CLIC4Q9Y696 253 aa20.37■□□□□ 0.85
MSH5-207ENST00000425703 ARL5CA6NH57 179 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 GALTP07902 379 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 PEX3P56589 373 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 ADAM15Q13444 863 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 SPIRE2Q8WWL2 714 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 IGSF21Q96ID5 467 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 TCF25Q9BQ70 676 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 CCSER1Q9C0I3 900 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 NXF3Q9H4D5 531 aaKnown RBP20.36■□□□□ 0.85
MSH5-207ENST00000425703 PDZD7Q9H5P4 517 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 TMEM134Q9H6X4 195 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 ARHGAP28Q9P2N2 729 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 HES2Q9Y543 173 aa20.36■□□□□ 0.85
MSH5-207ENST00000425703 SRPRBQ9Y5M8 271 aaKnown RBP20.36■□□□□ 0.85
MSH5-207ENST00000425703 K7ERI5 159 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 NPTXRO95502 500 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 HSP90AA1P07900 732 aaKnown RBP20.35■□□□□ 0.85
MSH5-207ENST00000425703 LTBRP36941 435 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 GRIN1Q05586 938 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 BMS1Q14692 1282 aaKnown RBP20.35■□□□□ 0.85
MSH5-207ENST00000425703 ADGRD2Q7Z7M1 963 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 DDX53Q86TM3 631 aaKnown RBP20.35■□□□□ 0.85
MSH5-207ENST00000425703 ZNF280BQ86YH2 543 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 FAM193BQ96PV7 902 aaPredicted RBP20.35■□□□□ 0.85
MSH5-207ENST00000425703 UHRF1Q96T88 793 aaPredicted RBP20.35■□□□□ 0.85
MSH5-207ENST00000425703 GAD1Q99259 594 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 ADPGKQ9BRR6 497 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 KIFC3Q9BVG8 833 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 TLE6Q9H808 572 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 POLD4Q9HCU8 107 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 ENTPD7Q9NQZ7 604 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 FBXO2Q9UK22 296 aaPredicted RBP20.35■□□□□ 0.85
MSH5-207ENST00000425703 NCOR1O75376 2440 aa20.35■□□□□ 0.85
MSH5-207ENST00000425703 TTLL13PA6NNM8 815 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 CCDC169A6NNP5 214 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 DDHD2O94830 711 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 CSPG5O95196 566 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 POMCP01189 267 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 ALDH2P05091 517 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 SSBP05455 408 aaKnown RBP eCLIP20.34■□□□□ 0.85
MSH5-207ENST00000425703 PLS3P13797 630 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 MLH1P40692 756 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 NRIP1P48552 1158 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 AFF1P51825 1210 aaKnown RBP20.34■□□□□ 0.85
MSH5-207ENST00000425703 SLC39A14Q15043 492 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 TMEM132AQ24JP5 1023 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 DCAF4L1Q3SXM0 396 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 FAM173BQ6P4H8 233 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 APBB1IPQ7Z5R6 666 aaPredicted RBP20.34■□□□□ 0.85
MSH5-207ENST00000425703 CDR2LQ86X02 465 aaPredicted RBP20.34■□□□□ 0.85
MSH5-207ENST00000425703 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.34■□□□□ 0.85
MSH5-207ENST00000425703 PLIN2Q99541 437 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 IGFLR1Q9H665 355 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 KMT5AQ9NQR1 393 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 DNAJB4Q9UDY4 337 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 ODF2LQ9ULJ1 636 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 FAM50BQ9Y247 325 aa20.34■□□□□ 0.85
MSH5-207ENST00000425703 NT5C1B-RDH14C9J2C7 533 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 B4GALT3O60512 393 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 SCP2P22307 547 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 GTF2F1P35269 517 aaKnown RBP eCLIP20.33■□□□□ 0.85
MSH5-207ENST00000425703 SLC11A1P49279 550 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 SMTNP53814 917 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 DSC1Q08554 894 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 SMC1AQ14683 1233 aaKnown RBP20.33■□□□□ 0.85
MSH5-207ENST00000425703 NT5DC1Q5TFE4 455 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 TMC7Q7Z402 723 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 TMEM173Q86WV6 379 aaPredicted RBP20.33■□□□□ 0.85
MSH5-207ENST00000425703 MRPL43Q8N983 215 aaKnown RBP20.33■□□□□ 0.85
MSH5-207ENST00000425703 RASSF8Q8NHQ8 419 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 KCNN1Q92952 543 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 USP28Q96RU2 1077 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 GBP3Q9H0R5 595 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 BLOC1S4Q9NUP1 217 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 TNFSF13BQ9Y275 285 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 PCDHGC5Q9Y5F6 944 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 IRAK3Q9Y616 596 aa20.33■□□□□ 0.85
MSH5-207ENST00000425703 PLXNA4Q9HCM2 1894 aa20.33■□□□□ 0.84
MSH5-207ENST00000425703 ATG2AQ2TAZ0 1938 aa20.32■□□□□ 0.84
MSH5-207ENST00000425703 GRXCR2A6NFK2 248 aa20.32■□□□□ 0.84
MSH5-207ENST00000425703 H3BQ06 376 aaPredicted RBP20.32■□□□□ 0.84
MSH5-207ENST00000425703 EDN1P05305 212 aa20.32■□□□□ 0.84
MSH5-207ENST00000425703 LIG1P18858 919 aa20.32■□□□□ 0.84
MSH5-207ENST00000425703 PLCG1P19174 1290 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms