RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 CSRNP2Q9H175 543 aa19.72■□□□□ 0.75
GPC1-203ENST00000425056 TMEM60Q9H2L4 133 aa19.72■□□□□ 0.75
GPC1-203ENST00000425056 FAN1Q9Y2M0 1017 aa19.72■□□□□ 0.75
GPC1-203ENST00000425056 NRP1O14786 923 aa19.71■□□□□ 0.75
GPC1-203ENST00000425056 ALDH2P05091 517 aa19.71■□□□□ 0.75
GPC1-203ENST00000425056 GLRA2P23416 452 aa19.71■□□□□ 0.75
GPC1-203ENST00000425056 DSC1Q08554 894 aa19.71■□□□□ 0.75
GPC1-203ENST00000425056 NCBP1Q09161 790 aaKnown RBP19.71■□□□□ 0.75
GPC1-203ENST00000425056 PIGOQ8TEQ8 1089 aa19.71■□□□□ 0.75
GPC1-203ENST00000425056 CPB2Q96IY4 423 aa19.71■□□□□ 0.75
GPC1-203ENST00000425056 TSHZ2Q9NRE2 1034 aa19.71■□□□□ 0.75
GPC1-203ENST00000425056 MARCH5Q9NX47 278 aa19.71■□□□□ 0.75
GPC1-203ENST00000425056 ARL5CA6NH57 179 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 C2CD4DB7Z1M9 353 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 USO1O60763 962 aaKnown RBP19.7■□□□□ 0.74
GPC1-203ENST00000425056 LILRB3O75022 631 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 SEC24BO95487 1268 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 SPATA31C1P0DKV0 1188 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 XRCC6P12956 609 aaKnown RBP eCLIP19.7■□□□□ 0.74
GPC1-203ENST00000425056 ARF4P18085 180 aaPredicted RBP19.7■□□□□ 0.74
GPC1-203ENST00000425056 MLH1P40692 756 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 SUGP1Q8IWZ8 645 aaKnown RBP19.7■□□□□ 0.74
GPC1-203ENST00000425056 COLGALT2Q8IYK4 626 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 FBXL6Q8N531 539 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 C12orf76Q8N812 135 aaPredicted RBP19.7■□□□□ 0.74
GPC1-203ENST00000425056 EMILIN2Q9BXX0 1053 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 POLR3FQ9H1D9 316 aaPredicted RBP19.7■□□□□ 0.74
GPC1-203ENST00000425056 RNF39Q9H2S5 420 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 HES2Q9Y543 173 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 C2orf16Q68DN1 1984 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 ZMYM2Q9UBW7 1377 aa19.7■□□□□ 0.74
GPC1-203ENST00000425056 SOD2P04179 222 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 CNPP09543 421 aaKnown RBP19.69■□□□□ 0.74
GPC1-203ENST00000425056 WEE2P0C1S8 567 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 MCM7P33993 719 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 CLCN4P51793 760 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 SAFBQ15424 915 aaKnown RBP eCLIP19.69■□□□□ 0.74
GPC1-203ENST00000425056 ZBTB33Q86T24 672 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 CABP7Q86V35 215 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 RNF168Q8IYW5 571 aaPredicted RBP19.69■□□□□ 0.74
GPC1-203ENST00000425056 ZFP42Q96MM3 310 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 KLHL5Q96PQ7 755 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 GAD1Q99259 594 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 HERC2P3Q9BVR0 1158 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 NXF3Q9H4D5 531 aaKnown RBP19.69■□□□□ 0.74
GPC1-203ENST00000425056 SFXN1Q9H9B4 322 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 TUFT1Q9NNX1 390 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 MYO10Q9HD67 2058 aa19.69■□□□□ 0.74
GPC1-203ENST00000425056 B4GALT5O43286 388 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 EFEMP2O95967 443 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 SSBP05455 408 aaKnown RBP eCLIP19.68■□□□□ 0.74
GPC1-203ENST00000425056 SCNN1GP51170 649 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 GUCY1B3Q02153 619 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 ORC2Q13416 577 aaPredicted RBP19.68■□□□□ 0.74
GPC1-203ENST00000425056 ATAT1Q5SQI0 421 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 KANK3Q6NY19 840 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 CATSPER3Q86XQ3 398 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 HACE1Q8IYU2 909 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 MCPH1Q8NEM0 835 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 LLPHQ9BRT6 129 aaKnown RBP19.68■□□□□ 0.74
GPC1-203ENST00000425056 TRIM6Q9C030 488 aaPredicted RBP19.68■□□□□ 0.74
GPC1-203ENST00000425056 MRPL17Q9NRX2 175 aaKnown RBP19.68■□□□□ 0.74
GPC1-203ENST00000425056 DBR1Q9UK59 544 aaKnown RBP19.68■□□□□ 0.74
GPC1-203ENST00000425056 LIMCH1Q9UPQ0 1083 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 SORCS3Q9UPU3 1222 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 USTQ9Y2C2 406 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 GIT1Q9Y2X7 761 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 PRG3Q9Y2Y8 225 aaPredicted RBP19.68■□□□□ 0.74
GPC1-203ENST00000425056 PLXNA3P51805 1871 aa19.68■□□□□ 0.74
GPC1-203ENST00000425056 MED24O75448 989 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 URODP06132 367 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 KLRC2P26717 231 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 OR1G1P47890 313 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 MTMR3Q13615 1198 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 CDCA2Q69YH5 1023 aaPredicted RBP19.67■□□□□ 0.74
GPC1-203ENST00000425056 SLC27A1Q6PCB7 646 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 TMC5Q6UXY8 1006 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 CCDC83Q8IWF9 413 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 ZDHHC14Q8IZN3 488 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 TDRD5Q8NAT2 981 aaKnown RBP19.67■□□□□ 0.74
GPC1-203ENST00000425056 KREMEN2Q8NCW0 462 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 PRSS33Q8NF86 280 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 C8orf76Q96K31 380 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 PRRX2Q99811 253 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 POLR3CQ9BUI4 534 aaPredicted RBP19.67■□□□□ 0.74
GPC1-203ENST00000425056 FOXP1Q9H334 677 aaPredicted RBP19.67■□□□□ 0.74
GPC1-203ENST00000425056 GPRC5CQ9NQ84 441 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 MIOSQ9NXC5 875 aa19.67■□□□□ 0.74
GPC1-203ENST00000425056 A0A087WWV3 80 aa19.66■□□□□ 0.74
GPC1-203ENST00000425056 A0A1B0GUA9 196 aa19.66■□□□□ 0.74
GPC1-203ENST00000425056 LRRIQ4A6NIV6 560 aa19.66■□□□□ 0.74
GPC1-203ENST00000425056 OR52Z1P0C646 297 aa19.66■□□□□ 0.74
GPC1-203ENST00000425056 ATP2B1P20020 1258 aa19.66■□□□□ 0.74
GPC1-203ENST00000425056 IER5LQ5T953 404 aa19.66■□□□□ 0.74
GPC1-203ENST00000425056 GPR149Q86SP6 731 aa19.66■□□□□ 0.74
GPC1-203ENST00000425056 ALYREFQ86V81 257 aaKnown RBP19.66■□□□□ 0.74
GPC1-203ENST00000425056 UBALD2Q8IYN6 164 aa19.66■□□□□ 0.74
GPC1-203ENST00000425056 GSTCDQ8NEC7 633 aa19.66■□□□□ 0.74
GPC1-203ENST00000425056 FEZF2Q8TBJ5 459 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms