RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 SYT2Q8N9I0 419 aaPredicted RBP7.79□□□□□ -1.16
EPHA4-206ENST00000424339 SLC17A8Q8NDX2 589 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 RAD54LQ92698 747 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 ABHD17AQ96GS6 310 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 DRC1Q96MC2 740 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 HTATIP2Q9BUP3 242 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 GTPBP4Q9BZE4 634 aaKnown RBP7.79□□□□□ -1.16
EPHA4-206ENST00000424339 SENP6Q9GZR1 1112 aaPredicted RBP7.79□□□□□ -1.16
EPHA4-206ENST00000424339 BHMT2Q9H2M3 363 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 RNPEPQ9H4A4 650 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 DHX33Q9H6R0 707 aaKnown RBP7.79□□□□□ -1.16
EPHA4-206ENST00000424339 ATP6V0A4Q9HBG4 840 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 TUBE1Q9UJT0 475 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 ODF2LQ9ULJ1 636 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 ARID2Q68CP9 1835 aa7.79□□□□□ -1.16
EPHA4-206ENST00000424339 IGKV6-21A0A0C4DH24 114 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 A0A1B0GVL5 298 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 SMIM35A0A1B0GVV1 85 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 H0YCG3 227 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 ASAP2O43150 1006 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 PRPF40AO75400 957 aaKnown RBP7.78□□□□□ -1.16
EPHA4-206ENST00000424339 MAFO75444 373 aaPredicted RBP7.78□□□□□ -1.16
EPHA4-206ENST00000424339 ZNF202O95125 648 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 STBD1O95210 358 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 PLA2G4BP0C869 781 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 CYP11B2P19099 503 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 PTGS1P23219 599 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 CDK7P50613 346 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 SLC12A3P55017 1021 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 ADAM17P78536 824 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 CENPCQ03188 943 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 RBL2Q08999 1139 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 PTK7Q13308 1070 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 MXD4Q14582 209 aaPredicted RBP7.78□□□□□ -1.16
EPHA4-206ENST00000424339 PPP2R5AQ15172 486 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 ZRSR1Q15695 479 aaKnown RBP7.78□□□□□ -1.16
EPHA4-206ENST00000424339 MTERF2Q49AM1 385 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 FAM47CQ5HY64 1035 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 SPECC1Q5M775 1068 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 SLC39A5Q6ZMH5 540 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 USP49Q70CQ1 688 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 RNF135Q8IUD6 432 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 FMR1NBQ8N0W7 255 aaPredicted RBP7.78□□□□□ -1.16
EPHA4-206ENST00000424339 CAGE1Q8TC20 777 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 PIGOQ8TEQ8 1089 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 LMBR1Q8WVP7 490 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 KIFAP3Q92845 792 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 PAWRQ96IZ0 340 aaKnown RBP7.78□□□□□ -1.16
EPHA4-206ENST00000424339 PNMA5Q96PV4 448 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 MAP7D2Q96T17 732 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 RUBCNLQ9H714 662 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 LMBRD1Q9NUN5 540 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 BLOC1S4Q9NUP1 217 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 KBTBD4Q9NVX7 518 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 WRAP73Q9P2S5 460 aaPredicted RBP7.78□□□□□ -1.16
EPHA4-206ENST00000424339 HDAC6Q9UBN7 1215 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 SEL1LQ9UBV2 794 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 NOD1Q9Y239 953 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 TELO2Q9Y4R8 837 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 PCDHA2Q9Y5H9 948 aa7.78□□□□□ -1.16
EPHA4-206ENST00000424339 ZBTB42B2RXF5 422 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 M0QZ92 97 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 C22orf31O95567 290 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 KLRC1P26715 233 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 MRE11P49959 708 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 NDUFA8P51970 172 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 PSMC6P62333 389 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 POU5F1BQ06416 359 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 BFSP2Q13515 415 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 TFDP1Q14186 410 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 MCM6Q14566 821 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 EMC2Q15006 297 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 PCBP1Q15365 356 aaKnown RBP eCLIP7.77□□□□□ -1.17
EPHA4-206ENST00000424339 SKIV2LQ15477 1246 aaKnown RBP7.77□□□□□ -1.17
EPHA4-206ENST00000424339 ECM1Q16610 540 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 PTGISQ16647 500 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 NAALADL2Q58DX5 795 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 IER5Q5VY09 327 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 MTHFD1LQ6UB35 978 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 KRBA2Q6ZNG9 492 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 SERINC5Q86VE9 423 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 FAM126BQ8IXS8 530 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 PDILTQ8N807 584 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 CNNM3Q8NE01 707 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 ENGASEQ8NFI3 743 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 PSPC1Q8WXF1 523 aaKnown RBP7.77□□□□□ -1.17
EPHA4-206ENST00000424339 CCDC47Q96A33 483 aaKnown RBP7.77□□□□□ -1.17
EPHA4-206ENST00000424339 SYAP1Q96A49 352 aaPredicted RBP7.77□□□□□ -1.17
EPHA4-206ENST00000424339 DHX58Q96C10 678 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 CHAMP1Q96JM3 812 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 CEP89Q96ST8 783 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 SETD4Q9NVD3 440 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 LARSQ9P2J5 1176 aaKnown RBP7.77□□□□□ -1.17
EPHA4-206ENST00000424339 GRIN2DO15399 1336 aa7.77□□□□□ -1.17
EPHA4-206ENST00000424339 A0A087X0B3 334 aa7.76□□□□□ -1.17
EPHA4-206ENST00000424339 PVALEFA0A1B0GWK0 134 aa7.76□□□□□ -1.17
EPHA4-206ENST00000424339 CCDC85CA6NKD9 419 aa7.76□□□□□ -1.17
EPHA4-206ENST00000424339 E9PMD0 336 aa7.76□□□□□ -1.17
EPHA4-206ENST00000424339 BNIP3LO60238 219 aa7.76□□□□□ -1.17
EPHA4-206ENST00000424339 USO1O60763 962 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms