RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 SYCE2Q6PIF2 218 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 POTEGQ6S5H5 508 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 PPFIBP1Q86W92 1011 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 ZNF280BQ86YH2 543 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 SMG8Q8ND04 991 aaKnown RBP18.61■□□□□ 0.57
CCDC78-203ENST00000423653 FAM122AQ96E09 287 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 CPB2Q96IY4 423 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 PRIMPOLQ96LW4 560 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 NECTIN4Q96NY8 510 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 EIF2AQ9BY44 585 aaKnown RBP18.61■□□□□ 0.57
CCDC78-203ENST00000423653 RAB34Q9BZG1 259 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 UPF2Q9HAU5 1272 aaKnown RBP18.61■□□□□ 0.57
CCDC78-203ENST00000423653 FAN1Q9Y2M0 1017 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 ARL5CA6NH57 179 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 POMCP01189 267 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 ALDH2P05091 517 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 ARF4P18085 180 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-203ENST00000423653 MLH1P40692 756 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 AMHR2Q16671 573 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 BCL7CQ8WUZ0 217 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-203ENST00000423653 RPGRIP1Q96KN7 1286 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 EMILIN2Q9BXX0 1053 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 C2orf40Q9H1Z8 148 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 S1PR5Q9H228 398 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 PRMT7Q9NVM4 692 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-203ENST00000423653 GIT1Q9Y2X7 761 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 STK24Q9Y6E0 443 aa18.6■□□□□ 0.57
CCDC78-203ENST00000423653 B4GALT3O60512 393 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 NR1I2O75469 434 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 DDHD2O94830 711 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 U2AF2P26368 475 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCDC78-203ENST00000423653 FXR2P51116 673 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCDC78-203ENST00000423653 PPP2R5AQ15172 486 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 PTPN14Q15678 1187 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 CDCA2Q69YH5 1023 aaPredicted RBP18.59■□□□□ 0.57
CCDC78-203ENST00000423653 PPP4R3CPQ6ZMV5 832 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 MAEAQ7L5Y9 396 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 AUTS2Q8WXX7 1259 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 RIPOR3Q96MK2 946 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 GAD1Q99259 594 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 APOL6Q9BWW8 343 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 APOL5Q9BWW9 433 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 NXF3Q9H4D5 531 aaKnown RBP18.59■□□□□ 0.57
CCDC78-203ENST00000423653 GPRC5CQ9NQ84 441 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 NR2E1Q9Y466 385 aa18.59■□□□□ 0.57
CCDC78-203ENST00000423653 TDRD15B5MCY1 1934 aaKnown RBP18.59■□□□□ 0.57
CCDC78-203ENST00000423653 LAD1O00515 517 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 URODP06132 367 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 CCT6AP40227 531 aaKnown RBP18.58■□□□□ 0.56
CCDC78-203ENST00000423653 MTHFRP42898 656 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 SCNN1GP51170 649 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 AFF1P51825 1210 aaKnown RBP18.58■□□□□ 0.56
CCDC78-203ENST00000423653 TMEM132AQ24JP5 1023 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 PADI6Q6TGC4 694 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 ADAM7Q9H2U9 754 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 MRPL17Q9NRX2 175 aaKnown RBP18.58■□□□□ 0.56
CCDC78-203ENST00000423653 LRWD1Q9UFC0 647 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 SSX2IPQ9Y2D8 614 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 PRG3Q9Y2Y8 225 aaPredicted RBP18.58■□□□□ 0.56
CCDC78-203ENST00000423653 HES2Q9Y543 173 aa18.58■□□□□ 0.56
CCDC78-203ENST00000423653 A0A087WWV3 80 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 A0A1B0GUA9 196 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 SPDYE4A6NLX3 237 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 NRP1O14786 923 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 N4BP3O15049 544 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 B4GALT5O43286 388 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 NPTXRO95502 500 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 CYP11B2P19099 503 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 DSC1Q08554 894 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 GRIK3Q13003 919 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 MAPK6Q16659 721 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 FAM187BQ17R55 369 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 COLGALT2Q8IYK4 626 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 EDAQ92838 391 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 ZFP42Q96MM3 310 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 RPS6KC1Q96S38 1066 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 ADPGKQ9BRR6 497 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 HERC2P3Q9BVR0 1158 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 VN1R3Q9BXE9 311 aa18.57■□□□□ 0.56
CCDC78-203ENST00000423653 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
CCDC78-203ENST00000423653 SOD2P04179 222 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 NAMPTP43490 491 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 OR1G1P47890 313 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 RARS2Q5T160 578 aaKnown RBP18.56■□□□□ 0.56
CCDC78-203ENST00000423653 ELMSAN1Q6PJG2 1045 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 CABP7Q86V35 215 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 DEPTORQ8TB45 409 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 SNX29Q8TEQ0 813 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 KIFAP3Q92845 792 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 IFT74Q96LB3 600 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 RNF39Q9H2S5 420 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 SFXN1Q9H9B4 322 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 TSHZ2Q9NRE2 1034 aa18.56■□□□□ 0.56
CCDC78-203ENST00000423653 SSBP05455 408 aaKnown RBP eCLIP18.55■□□□□ 0.56
CCDC78-203ENST00000423653 PRKCBP05771 671 aa18.55■□□□□ 0.56
CCDC78-203ENST00000423653 EPCAMP16422 314 aa18.55■□□□□ 0.56
CCDC78-203ENST00000423653 KLRC2P26717 231 aa18.55■□□□□ 0.56
CCDC78-203ENST00000423653 EFNA5P52803 228 aa18.55■□□□□ 0.56
CCDC78-203ENST00000423653 PRPF4BQ13523 1007 aaKnown RBP18.55■□□□□ 0.56
CCDC78-203ENST00000423653 PDIA5Q14554 519 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms