RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 STK33Q9BYT3 514 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 JPH1Q9HDC5 661 aaPredicted RBP12.89□□□□□ -0.35
PTPRN-204ENST00000423636 GINS2Q9Y248 185 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 FOXO6A8MYZ6 492 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 CD58P19256 250 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
PTPRN-204ENST00000423636 NLRP11P59045 1033 aaKnown RBP12.89□□□□□ -0.35
PTPRN-204ENST00000423636 VGLL4Q14135 290 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 SCARA5Q6ZMJ2 495 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 VSIG10LQ86VR7 867 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 UBLCP1Q8WVY7 318 aaPredicted RBP12.89□□□□□ -0.35
PTPRN-204ENST00000423636 MOV10L1Q9BXT6 1211 aaKnown RBP12.89□□□□□ -0.35
PTPRN-204ENST00000423636 XPNPEP1Q9NQW7 623 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 DMAC2Q9NW81 257 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 CYP39A1Q9NYL5 469 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 USTQ9Y2C2 406 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 PCDHGC5Q9Y5F6 944 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 PTPRJQ12913 1337 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 UMODL1Q5DID0 1318 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 GUCY2CP25092 1073 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 PDCLQ13371 301 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 TUBB2AQ13885 445 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 STXBP4Q6ZWJ1 553 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 ZC3H3Q8IXZ2 948 aaKnown RBP12.88□□□□□ -0.35
PTPRN-204ENST00000423636 LRRC57Q8N9N7 239 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 OLIG1Q8TAK6 271 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 AGPAT1Q99943 283 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 TUBB2BQ9BVA1 445 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 HEMGNQ9BXL5 484 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 GOLGA6CA6NDK9 693 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 SPDYE16A6NNV3 312 aaPredicted RBP12.88□□□□□ -0.35
PTPRN-204ENST00000423636 IRF6O14896 467 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 TRIM66O15016 1216 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTPRN-204ENST00000423636 GOLGA6DP0CG33 693 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 SV2AQ7L0J3 742 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 LPAR1Q92633 364 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 C18orf8Q96DM3 657 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 ADAM33Q9BZ11 813 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 NUCKS1Q9H1E3 243 aaKnown RBP12.88□□□□□ -0.35
PTPRN-204ENST00000423636 GOLGA6AQ9NYA3 693 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 ODF2LQ9ULJ1 636 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 SNX24Q9Y343 169 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 CD2APQ9Y5K6 639 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
PTPRN-204ENST00000423636 TLDC2A0PJX2 215 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 PPP1R37O75864 691 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 FERP16591 822 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 IBSPP21815 317 aaPredicted RBP12.88□□□□□ -0.35
PTPRN-204ENST00000423636 CCDC25Q86WR0 208 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 RNF10Q8N5U6 811 aaKnown RBP12.88□□□□□ -0.35
PTPRN-204ENST00000423636 AENQ8WTP8 325 aaKnown RBP12.88□□□□□ -0.35
PTPRN-204ENST00000423636 SLC9A2Q9UBY0 812 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 AMFRQ9UKV5 643 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
PTPRN-204ENST00000423636 SLC16A3O15427 465 aaKnown RBP12.87□□□□□ -0.35
PTPRN-204ENST00000423636 ATP4AP20648 1035 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 CCND2P30279 289 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 TNFSF9P41273 254 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 MAP9Q49MG5 647 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 EAPPQ56P03 285 aaPredicted RBP12.87□□□□□ -0.35
PTPRN-204ENST00000423636 TTMPQ5BVD1 217 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 MMGT1Q8N4V1 131 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 PIK3R2O00459 728 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 KCNA2P16389 499 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 LIG4P49917 911 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 SMTNP53814 917 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 PPATQ06203 517 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 ADCY1Q08828 1119 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
PTPRN-204ENST00000423636 ASAP3Q8TDY4 903 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
PTPRN-204ENST00000423636 AFAP1L1Q8TED9 768 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 ATG4AQ8WYN0 398 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 ZNF516Q92618 1163 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 SYN2Q92777 582 aaPredicted RBP12.87□□□□□ -0.35
PTPRN-204ENST00000423636 KLRG1Q96E93 195 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 PWWP2AQ96N64 755 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 HAPLN2Q9GZV7 340 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 TBC1D22BQ9NU19 505 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 FBXO40Q9UH90 709 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 COMTP21964 271 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 GUCY1A3Q02108 690 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 TAS1R3Q7RTX0 852 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 EDEM3Q9BZQ6 932 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 ATP8A1Q9Y2Q0 1164 aa12.87□□□□□ -0.35
PTPRN-204ENST00000423636 DCDC2CA8MYV0 355 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 SPOPO43791 374 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 DSG3P32926 999 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 SLCO1A2P46721 670 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 Q3C1V9 767 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 HP1BP3Q5SSJ5 553 aaPredicted RBP12.86□□□□□ -0.35
PTPRN-204ENST00000423636 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 C1orf54Q8WWF1 131 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 ZNF653Q96CK0 615 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 RNPC3Q96LT9 517 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms