RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 USO1O60763 962 aaKnown RBP20.54■□□□□ 0.88
SREBF1-206ENST00000423161 SEC24BO95487 1268 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 ALDH2P05091 517 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 SSBP05455 408 aaKnown RBP eCLIP20.54■□□□□ 0.88
SREBF1-206ENST00000423161 WEE2P0C1S8 567 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 ATP2B1P20020 1258 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 MCM7P33993 719 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 ARL2P36404 184 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 GUCY1B3Q02153 619 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 MBTD1Q05BQ5 628 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 SLC22A17Q8WUG5 538 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 CSRNP2Q9H175 543 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 TMEM60Q9H2L4 133 aa20.54■□□□□ 0.88
SREBF1-206ENST00000423161 A0A087WWV3 80 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 C2CD4DB7Z1M9 353 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 GLRA2P23416 452 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 MLH1P40692 756 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 NHLH1Q02575 133 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 SAFBQ15424 915 aaKnown RBP eCLIP20.53■□□□□ 0.88
SREBF1-206ENST00000423161 AMHR2Q16671 573 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 KIAA1841Q6NSI8 718 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 KANK3Q6NY19 840 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 CABP7Q86V35 215 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 PPFIBP1Q86W92 1011 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 SUGP1Q8IWZ8 645 aaKnown RBP20.53■□□□□ 0.88
SREBF1-206ENST00000423161 APOL6Q9BWW8 343 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 EMILIN2Q9BXX0 1053 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 TRIM6Q9C030 488 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-206ENST00000423161 POLR3FQ9H1D9 316 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-206ENST00000423161 RNF39Q9H2S5 420 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 PRG3Q9Y2Y8 225 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-206ENST00000423161 HES2Q9Y543 173 aa20.53■□□□□ 0.88
SREBF1-206ENST00000423161 ARL5CA6NH57 179 aa20.52■□□□□ 0.88
SREBF1-206ENST00000423161 SPDYE4A6NLX3 237 aa20.52■□□□□ 0.88
SREBF1-206ENST00000423161 INPPL1O15357 1258 aa20.52■□□□□ 0.88
SREBF1-206ENST00000423161 ARF4P18085 180 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-206ENST00000423161 CCDC83Q8IWF9 413 aa20.52■□□□□ 0.88
SREBF1-206ENST00000423161 COLGALT2Q8IYK4 626 aa20.52■□□□□ 0.88
SREBF1-206ENST00000423161 KLHL5Q96PQ7 755 aa20.52■□□□□ 0.88
SREBF1-206ENST00000423161 GAD1Q99259 594 aa20.52■□□□□ 0.88
SREBF1-206ENST00000423161 NFKBIZQ9BYH8 718 aa20.52■□□□□ 0.88
SREBF1-206ENST00000423161 MRPL17Q9NRX2 175 aaKnown RBP20.52■□□□□ 0.88
SREBF1-206ENST00000423161 MTCL1Q9Y4B5 1905 aaKnown RBP20.52■□□□□ 0.88
SREBF1-206ENST00000423161 SPATA31C1P0DKV0 1188 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 XRCC6P12956 609 aaKnown RBP eCLIP20.51■□□□□ 0.873e-7■□□□□ 10.9
SREBF1-206ENST00000423161 KLRC2P26717 231 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 OR1G1P47890 313 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 SCNN1GP51170 649 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 ATAT1Q5SQI0 421 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 ALYREFQ86V81 257 aaKnown RBP20.51■□□□□ 0.87
SREBF1-206ENST00000423161 HACE1Q8IYU2 909 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 FBXL6Q8N531 539 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 ASIC4Q96FT7 647 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 C8orf76Q96K31 380 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 ZFP42Q96MM3 310 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 NXF3Q9H4D5 531 aaKnown RBP20.51■□□□□ 0.87
SREBF1-206ENST00000423161 TUFT1Q9NNX1 390 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 MARCH5Q9NX47 278 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 DBR1Q9UK59 544 aaKnown RBP20.51■□□□□ 0.87
SREBF1-206ENST00000423161 LIMCH1Q9UPQ0 1083 aa20.51■□□□□ 0.87
SREBF1-206ENST00000423161 LRRIQ4A6NIV6 560 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 C2CD2LO14523 706 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 B4GALT5O43286 388 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 SOD2P04179 222 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 URODP06132 367 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 CNPP09543 421 aaKnown RBP20.5■□□□□ 0.87
SREBF1-206ENST00000423161 CLCN4P51793 760 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 DSC1Q08554 894 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 TMC5Q6UXY8 1006 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 MAEAQ7L5Y9 396 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 CDR2LQ86X02 465 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-206ENST00000423161 CATSPER3Q86XQ3 398 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 TDRD5Q8NAT2 981 aaKnown RBP20.5■□□□□ 0.87
SREBF1-206ENST00000423161 KREMEN2Q8NCW0 462 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 HERC2P3Q9BVR0 1158 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 SFXN1Q9H9B4 322 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 GPRC5CQ9NQ84 441 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 MIOSQ9NXC5 875 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 GIT1Q9Y2X7 761 aa20.5■□□□□ 0.87
SREBF1-206ENST00000423161 LILRB3O75022 631 aa20.49■□□□□ 0.87
SREBF1-206ENST00000423161 MED24O75448 989 aa20.49■□□□□ 0.87
SREBF1-206ENST00000423161 NPTXRO95502 500 aa20.49■□□□□ 0.87
SREBF1-206ENST00000423161 SLC27A1Q6PCB7 646 aa20.49■□□□□ 0.87
SREBF1-206ENST00000423161 MCPH1Q8NEM0 835 aa20.49■□□□□ 0.87
SREBF1-206ENST00000423161 FEZF2Q8TBJ5 459 aa20.49■□□□□ 0.87
SREBF1-206ENST00000423161 SORCS3Q9UPU3 1222 aa20.49■□□□□ 0.87
SREBF1-206ENST00000423161 OR52Z1P0C646 297 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 AKAP5P24588 427 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 ORC2Q13416 577 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-206ENST00000423161 MTMR3Q13615 1198 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 IER5LQ5T953 404 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 POTEGQ6S5H5 508 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 TAS1R1Q7RTX1 841 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 PRSS33Q8NF86 280 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 ERMNQ8TAM6 284 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 NACC1Q96RE7 527 aa20.48■□□□□ 0.87
SREBF1-206ENST00000423161 LLPHQ9BRT6 129 aaKnown RBP20.48■□□□□ 0.87
SREBF1-206ENST00000423161 POLR3CQ9BUI4 534 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-206ENST00000423161 FOXP1Q9H334 677 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-206ENST00000423161 SSX2IPQ9Y2D8 614 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms