RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 HES6Q96HZ4 224 aa14.91□□□□□ -0.02
CDCA3-202ENST00000422785 POLR3FQ9H1D9 316 aaPredicted RBP14.91□□□□□ -0.02
CDCA3-202ENST00000422785 SEPT11Q9NVA2 429 aaKnown RBP14.91□□□□□ -0.02
CDCA3-202ENST00000422785 TAS2R14Q9NYV8 317 aa14.91□□□□□ -0.02
CDCA3-202ENST00000422785 ARHGAP28Q9P2N2 729 aa14.91□□□□□ -0.02
CDCA3-202ENST00000422785 FBXO40Q9UH90 709 aa14.91□□□□□ -0.02
CDCA3-202ENST00000422785 MAFBQ9Y5Q3 323 aaPredicted RBP14.91□□□□□ -0.02
CDCA3-202ENST00000422785 EPHB4P54760 987 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 TNNC1P63316 161 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 CNTN2Q02246 1040 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 PPATQ06203 517 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 EMBQ6PCB8 327 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 CYFIP1Q7L576 1253 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 PALB2Q86YC2 1186 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 IFT20Q8IY31 132 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 FAM71AQ8IYT1 594 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 METTL13Q8N6R0 699 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 SLC20A1Q8WUM9 679 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 GDAP1L1Q96MZ0 367 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 OSGEPQ9NPF4 335 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 GDF3Q9NR23 364 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 ZC3H4Q9UPT8 1303 aaKnown RBP14.9□□□□□ -0.02
CDCA3-202ENST00000422785 PTPRFP10586 1907 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 HNRNPDLO14979 420 aaKnown RBP14.9□□□□□ -0.02
CDCA3-202ENST00000422785 CEP104O60308 925 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 SORBS3O60504 671 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 ABCB4P21439 1286 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 GPC3P51654 580 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 RNASE9P60153 205 aaKnown RBP14.9□□□□□ -0.02
CDCA3-202ENST00000422785 CYP24A1Q07973 514 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 RIOX2Q8IUF8 465 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 GPD1LQ8N335 351 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 SCFD2Q8WU76 684 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 SEMA4DQ92854 862 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 CALR3Q96L12 384 aaKnown RBP14.9□□□□□ -0.02
CDCA3-202ENST00000422785 KRT12Q99456 494 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 ZNF302Q9NR11 478 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 ADAM21Q9UKJ8 722 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 AMFRQ9UKV5 643 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 SYNGAP1Q96PV0 1343 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 MYH9P35579 1960 aaKnown RBP14.9□□□□□ -0.02
CDCA3-202ENST00000422785 BUB1BO60566 1050 aaPredicted RBP14.9□□□□□ -0.02
CDCA3-202ENST00000422785 GLI1P08151 1106 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 CYP2C19P33261 490 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 MFAP3P55082 362 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 MTERF2Q49AM1 385 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 TAS1R3Q7RTX0 852 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 RASGEF1CQ8N431 466 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 KCNN1Q92952 543 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 KAT5Q92993 513 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 KREMEN1Q96MU8 473 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 POP1Q99575 1024 aaKnown RBP14.9□□□□□ -0.02
CDCA3-202ENST00000422785 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.9□□□□□ -0.023e-7■■■□□ 14.6
CDCA3-202ENST00000422785 THAP2Q9H0W7 228 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 ISCUQ9H1K1 167 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 BTBD7Q9P203 1132 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 CSADQ9Y600 493 aa14.9□□□□□ -0.02
CDCA3-202ENST00000422785 A0A0G2JMZ2 1700 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 PGRMC1O00264 195 aaKnown RBP14.89□□□□□ -0.03
CDCA3-202ENST00000422785 HEXIM1O94992 359 aaKnown RBP14.89□□□□□ -0.03
CDCA3-202ENST00000422785 ATP4AP20648 1035 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 SCP2P22307 547 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 ALDH5A1P51649 535 aaPredicted RBP14.89□□□□□ -0.03
CDCA3-202ENST00000422785 FSTL1Q12841 308 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 EMC2Q15006 297 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 TCEAL1Q15170 157 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 SND1Q7KZF4 910 aaKnown RBP eCLIP14.89□□□□□ -0.03
CDCA3-202ENST00000422785 PPM1KQ8N3J5 372 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 FBXL13Q8NEE6 735 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 SHC3Q92529 594 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 EXOC4Q96A65 974 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 ARHGEF26Q96DR7 871 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 ADARB2Q9NS39 739 aaKnown RBP14.89□□□□□ -0.03
CDCA3-202ENST00000422785 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.89□□□□□ -0.03
CDCA3-202ENST00000422785 VPS18Q9P253 973 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 OATP04181 439 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 POLGP54098 1239 aaPredicted RBP14.89□□□□□ -0.03
CDCA3-202ENST00000422785 HADHBP55084 474 aaKnown RBP14.89□□□□□ -0.03
CDCA3-202ENST00000422785 PTPROQ16827 1216 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 SEPT14Q6ZU15 432 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 RHOT2Q8IXI1 618 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 RPUSD2Q8IZ73 545 aaKnown RBP14.89□□□□□ -0.03
CDCA3-202ENST00000422785 CAVIN3Q969G5 261 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 BICD1Q96G01 975 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 FAN1Q9Y2M0 1017 aa14.89□□□□□ -0.03
CDCA3-202ENST00000422785 PAPPA2Q9BXP8 1791 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 IGKV6D-21A0A0A0MT36 114 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 SYF2O95926 243 aaKnown RBP14.88□□□□□ -0.03
CDCA3-202ENST00000422785 USP8P40818 1118 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 GYS2P54840 703 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 DLK2Q6UY11 383 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 HELQQ8TDG4 1101 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 EPS8L1Q8TE68 723 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 ZNF526Q8TF50 670 aaPredicted RBP14.88□□□□□ -0.03
CDCA3-202ENST00000422785 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 RAB20Q9NX57 234 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 NOCTQ9UK39 431 aaKnown RBP14.88□□□□□ -0.03
CDCA3-202ENST00000422785 NOC2LQ9Y3T9 749 aaKnown RBP14.88□□□□□ -0.03
CDCA3-202ENST00000422785 RTN2O75298 545 aa14.88□□□□□ -0.03
CDCA3-202ENST00000422785 DDNO94850 711 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms