RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 B4GALT5O43286 388 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 CLASP2O75122 1294 aaKnown RBP28.26■■■□□ 2.11
SMDT1-202ENST00000422252 ALDH2P05091 517 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 CTSAP10619 480 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 HOXB8P17481 243 aaPredicted RBP28.26■■■□□ 2.11
SMDT1-202ENST00000422252 CCT6AP40227 531 aaKnown RBP28.26■■■□□ 2.11
SMDT1-202ENST00000422252 PTGDRQ13258 359 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 GIT2Q14161 759 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 SYCE2Q6PIF2 218 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 AUTS2Q8WXX7 1259 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 PHF7Q9BWX1 381 aaPredicted RBP28.26■■■□□ 2.11
SMDT1-202ENST00000422252 STK39Q9UEW8 545 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 FAN1Q9Y2M0 1017 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 HES2Q9Y543 173 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 HCFC2Q9Y5Z7 792 aa28.26■■■□□ 2.11
SMDT1-202ENST00000422252 ARL5CA6NH57 179 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 INPPL1O15357 1258 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 CYP11B2P19099 503 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 PDIA5Q14554 519 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 CDCA2Q69YH5 1023 aaPredicted RBP28.25■■■□□ 2.11
SMDT1-202ENST00000422252 SLC27A1Q6PCB7 646 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 RNF135Q8IUD6 432 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 ZBTB8OSQ8IWT0 167 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 HACE1Q8IYU2 909 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 TMX3Q96JJ7 454 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 PRIMPOLQ96LW4 560 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 GAD1Q99259 594 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 VN1R3Q9BXE9 311 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 PRMT7Q9NVM4 692 aaPredicted RBP28.25■■■□□ 2.11
SMDT1-202ENST00000422252 STK24Q9Y6E0 443 aa28.25■■■□□ 2.11
SMDT1-202ENST00000422252 A0A1B0GUA9 196 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 LOC730098B7Z3J9 87 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 MLH1P40692 756 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 ECM1Q16610 540 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 PPP4R3CPQ6ZMV5 832 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 IGSF22Q8N9C0 903 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 TMEM87AQ8NBN3 555 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 APOL6Q9BWW8 343 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 RAB34Q9BZG1 259 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 C2orf40Q9H1Z8 148 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 NXF3Q9H4D5 531 aaKnown RBP28.24■■■□□ 2.11
SMDT1-202ENST00000422252 GIT1Q9Y2X7 761 aa28.24■■■□□ 2.11
SMDT1-202ENST00000422252 LAD1O00515 517 aa28.23■■■□□ 2.11
SMDT1-202ENST00000422252 NRP1O14786 923 aa28.23■■■□□ 2.11
SMDT1-202ENST00000422252 CD2BP2O95400 341 aaKnown RBP28.23■■■□□ 2.11
SMDT1-202ENST00000422252 NPTXRO95502 500 aa28.23■■■□□ 2.11
SMDT1-202ENST00000422252 MCTP1Q6DN14 999 aa28.23■■■□□ 2.11
SMDT1-202ENST00000422252 CDR2LQ86X02 465 aaPredicted RBP28.23■■■□□ 2.11
SMDT1-202ENST00000422252 BSNDQ8WZ55 320 aa28.23■■■□□ 2.11
SMDT1-202ENST00000422252 APOL5Q9BWW9 433 aa28.23■■■□□ 2.11
SMDT1-202ENST00000422252 MUTYHQ9UIF7 546 aa28.23■■■□□ 2.11
SMDT1-202ENST00000422252 PRR33A8MZF0 331 aa28.22■■■□□ 2.11
SMDT1-202ENST00000422252 SCNN1GP51170 649 aa28.22■■■□□ 2.11
SMDT1-202ENST00000422252 CBX2Q14781 532 aaPredicted RBP28.22■■■□□ 2.11
SMDT1-202ENST00000422252 FAM187BQ17R55 369 aa28.22■■■□□ 2.11
SMDT1-202ENST00000422252 TPRNQ4KMQ1 711 aa28.22■■■□□ 2.11
SMDT1-202ENST00000422252 COLGALT2Q8IYK4 626 aa28.22■■■□□ 2.11
SMDT1-202ENST00000422252 ZFP42Q96MM3 310 aa28.22■■■□□ 2.11
SMDT1-202ENST00000422252 BHMT2Q9H2M3 363 aa28.22■■■□□ 2.11
SMDT1-202ENST00000422252 FZD8Q9H461 694 aa28.22■■■□□ 2.11
SMDT1-202ENST00000422252 KIAA1024Q9UPX6 916 aa28.22■■■□□ 2.11
SMDT1-202ENST00000422252 PTPN14Q15678 1187 aa28.21■■■□□ 2.11
SMDT1-202ENST00000422252 HERC4Q5GLZ8 1057 aaPredicted RBP28.21■■■□□ 2.11
SMDT1-202ENST00000422252 SNX29Q8TEQ0 813 aa28.21■■■□□ 2.11
SMDT1-202ENST00000422252 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.21■■■□□ 2.11
SMDT1-202ENST00000422252 DDX19AQ9NUU7 478 aaKnown RBP28.21■■■□□ 2.11
SMDT1-202ENST00000422252 MIOSQ9NXC5 875 aa28.21■■■□□ 2.11
SMDT1-202ENST00000422252 AKAP5P24588 427 aa28.2■■■□□ 2.1
SMDT1-202ENST00000422252 GJB2P29033 226 aa28.2■■■□□ 2.1
SMDT1-202ENST00000422252 PRPHP41219 470 aa28.2■■■□□ 2.1
SMDT1-202ENST00000422252 NAMPTP43490 491 aa28.2■■■□□ 2.1
SMDT1-202ENST00000422252 MCM2P49736 904 aa28.2■■■□□ 2.1
SMDT1-202ENST00000422252 DSC1Q08554 894 aa28.2■■■□□ 2.1
SMDT1-202ENST00000422252 PPP2R5AQ15172 486 aa28.2■■■□□ 2.1
SMDT1-202ENST00000422252 RPGRIP1Q96KN7 1286 aa28.2■■■□□ 2.1
SMDT1-202ENST00000422252 PRG3Q9Y2Y8 225 aaPredicted RBP28.2■■■□□ 2.1
SMDT1-202ENST00000422252 OR1G1P47890 313 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 ITIH3Q06033 890 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 MAPK6Q16659 721 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 RILPL1Q5EBL4 403 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 DEPTORQ8TB45 409 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 TBC1D32Q96NH3 1257 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 MARCH5Q9NX47 278 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 PARP2Q9UGN5 583 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 HCN4Q9Y3Q4 1203 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 ZMYM2Q9UBW7 1377 aa28.19■■■□□ 2.1
SMDT1-202ENST00000422252 N4BP3O15049 544 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 SSBP05455 408 aaKnown RBP eCLIP28.18■■■□□ 2.1
SMDT1-202ENST00000422252 PRKCBP05771 671 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 PRPF4BQ13523 1007 aaKnown RBP28.18■■■□□ 2.1
SMDT1-202ENST00000422252 IL17AQ16552 155 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 TMEM132AQ24JP5 1023 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 KRT79Q5XKE5 535 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 CES5AQ6NT32 575 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 DTHD1Q6ZMT9 781 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 KIFAP3Q92845 792 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 IFT74Q96LB3 600 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 CCDC113Q9H0I3 377 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 ADAM7Q9H2U9 754 aa28.18■■■□□ 2.1
SMDT1-202ENST00000422252 DZANK1Q9NVP4 752 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms