RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 MYOTQ9UBF9 498 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 FBXL7Q9UJT9 491 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 MAP3K15Q6ZN16 1313 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 TAF1P21675 1872 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 CUL9Q8IWT3 2517 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 LAMB4A4D0S4 1761 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 LAMB2P55268 1798 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 ASTN2O75129 1339 aaPredicted RBP6.37□□□□□ -1.39
SFXN1-202ENST00000421887 SP3Q02447 781 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 PARP10Q53GL7 1025 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 CCDC103Q8IW40 242 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 TMEM87AQ8NBN3 555 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 IL17DQ8TAD2 202 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 NPLOC4Q8TAT6 608 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 AJUBAQ96IF1 538 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 APBA2Q99767 749 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 UTP14AQ9BVJ6 771 aaKnown RBP6.37□□□□□ -1.39
SFXN1-202ENST00000421887 KNSTRNQ9Y448 316 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 CENPFP49454 3210 aa6.37□□□□□ -1.39
SFXN1-202ENST00000421887 KDM3BQ7LBC6 1761 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 ZNF609O15014 1411 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 UBN2Q6ZU65 1347 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 U2SURPO15042 1029 aaKnown RBP6.36□□□□□ -1.39
SFXN1-202ENST00000421887 NTSR2O95665 410 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 GLRBP48167 497 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 RAC3P60763 192 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 GRAPQ13588 217 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 TUBA3CQ13748 450 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 PRKG1Q13976 671 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 MRPL58Q14197 206 aaKnown RBP6.36□□□□□ -1.39
SFXN1-202ENST00000421887 TUBA3EQ6PEY2 450 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 Q6ZSN1 163 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 DEFB123Q8N688 67 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 AGBL3Q8NEM8 1001 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 GRAPLQ8TC17 118 aaPredicted RBP6.36□□□□□ -1.39
SFXN1-202ENST00000421887 LARP4BQ92615 738 aaKnown RBP6.36□□□□□ -1.39
SFXN1-202ENST00000421887 LGR4Q9BXB1 951 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 PANK3Q9H999 370 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 MYOZ2Q9NPC6 264 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 DLL4Q9NR61 685 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 RRP7AQ9Y3A4 280 aaKnown RBP6.36□□□□□ -1.39
SFXN1-202ENST00000421887 PCDHGB7Q9Y5F8 929 aa6.36□□□□□ -1.39
SFXN1-202ENST00000421887 BRCA2P51587 3418 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 CEMIPQ8WUJ3 1361 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 WDHD1O75717 1129 aaPredicted RBP6.35□□□□□ -1.39
SFXN1-202ENST00000421887 DGKIO75912 1065 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 VIL1P09327 827 aaKnown RBP6.35□□□□□ -1.39
SFXN1-202ENST00000421887 ZBTB48P10074 688 aaPredicted RBP6.35□□□□□ -1.39
SFXN1-202ENST00000421887 MYL6BP14649 208 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 CRHR2Q13324 411 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 KIF22Q14807 665 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 ZNF394Q53GI3 561 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 SLC10A5Q5PT55 438 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 E4F1Q66K89 784 aaPredicted RBP6.35□□□□□ -1.39
SFXN1-202ENST00000421887 MRGPRGQ86SM5 289 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 ZNF34Q8IZ26 560 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 CACTINQ8WUQ7 758 aaKnown RBP6.35□□□□□ -1.39
SFXN1-202ENST00000421887 FAM89AQ96GI7 184 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 AGAP2Q99490 1192 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 NKX2-4Q9H2Z4 354 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 CLDND1Q9NY35 253 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 SCAF8Q9UPN6 1271 aaKnown RBP6.35□□□□□ -1.39
SFXN1-202ENST00000421887 STXBP5LQ9Y2K9 1186 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 PCDHA2Q9Y5H9 948 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 PTCH2Q9Y6C5 1203 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 COL6A3P12111 3177 aa6.35□□□□□ -1.39
SFXN1-202ENST00000421887 RTL9Q8NET4 1388 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 LRRC37AA6NMS7 1700 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 H7BY64 318 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 ARNTLO00327 626 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 MEFVO15553 781 aaPredicted RBP6.34□□□□□ -1.39
SFXN1-202ENST00000421887 KNG1P01042 644 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 ZNF888P0CJ79 500 aaPredicted RBP6.34□□□□□ -1.39
SFXN1-202ENST00000421887 ECI1P42126 302 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 ZNF280AP59817 542 aaPredicted RBP6.34□□□□□ -1.39
SFXN1-202ENST00000421887 GRIN1Q05586 938 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 CYP4F3Q08477 520 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 USP10Q14694 798 aaKnown RBP6.34□□□□□ -1.39
SFXN1-202ENST00000421887 EMC4Q5J8M3 183 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 VHLLQ6RSH7 139 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 POLNQ7Z5Q5 900 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 PROSER1Q86XN7 944 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 TRIM59Q8IWR1 403 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 DTX3Q8N9I9 347 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 C19orf47Q8N9M1 422 aaKnown RBP6.34□□□□□ -1.39
SFXN1-202ENST00000421887 RCBTB1Q8NDN9 531 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.34□□□□□ -1.39
SFXN1-202ENST00000421887 OR14A2Q96R54 314 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 ZFP69BQ9UJL9 534 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 DMRT1Q9Y5R6 373 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 SCN9AQ15858 1988 aa6.34□□□□□ -1.39
SFXN1-202ENST00000421887 PSME4Q14997 1843 aa6.34□□□□□ -1.4
SFXN1-202ENST00000421887 DUOX1Q9NRD9 1551 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 CKMP06732 381 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 CR2P20023 1033 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 MAKP20794 623 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 KCNAB2Q13303 367 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 LSAMPQ13449 338 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 FNDC7Q5VTL7 733 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 STPG3Q8N7X2 389 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms