RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 ATF7IP2Q5U623 682 aa20.44■□□□□ 0.86
DDR1-233ENST00000421124 MRPL10Q7Z7H8 261 aaKnown RBP20.44■□□□□ 0.86
DDR1-233ENST00000421124 CDR2LQ86X02 465 aaPredicted RBP20.44■□□□□ 0.86
DDR1-233ENST00000421124 SFR1Q86XK3 245 aa20.44■□□□□ 0.86
DDR1-233ENST00000421124 ABI1Q8IZP0 508 aa20.44■□□□□ 0.86
DDR1-233ENST00000421124 SLC17A8Q8NDX2 589 aa20.44■□□□□ 0.86
DDR1-233ENST00000421124 KCNN1Q92952 543 aa20.44■□□□□ 0.86
DDR1-233ENST00000421124 FAM161BQ96MY7 647 aa20.44■□□□□ 0.86
DDR1-233ENST00000421124 MRPL4Q9BYD3 311 aaKnown RBP20.44■□□□□ 0.86
DDR1-233ENST00000421124 TRIM6Q9C030 488 aaPredicted RBP20.44■□□□□ 0.86
DDR1-233ENST00000421124 GOLPH3LQ9H4A5 285 aa20.44■□□□□ 0.86
DDR1-233ENST00000421124 PDZD7Q9H5P4 517 aa20.44■□□□□ 0.86
DDR1-233ENST00000421124 RNF19AQ9NV58 838 aa20.44■□□□□ 0.86
DDR1-233ENST00000421124 FRMD3A2A2Y4 597 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 TBKBP1A7MCY6 615 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 NPTXRO95502 500 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 ABCD1P33897 745 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 LONRF3Q496Y0 759 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 CNNM4Q6P4Q7 775 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 CCDC65Q8IXS2 484 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 LPPQ93052 612 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 TGS1Q96RS0 853 aaKnown RBP20.43■□□□□ 0.86
DDR1-233ENST00000421124 FIZ1Q96SL8 496 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 C7orf25Q9BPX7 421 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 ADPGKQ9BRR6 497 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 TMEM117Q9H0C3 514 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 PANK4Q9NVE7 773 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 IPPQ9Y573 584 aa20.43■□□□□ 0.86
DDR1-233ENST00000421124 NMT1P30419 496 aaKnown RBP20.42■□□□□ 0.86
DDR1-233ENST00000421124 AFMP43652 599 aa20.42■□□□□ 0.86
DDR1-233ENST00000421124 ERVK-21P61565 698 aa20.42■□□□□ 0.86
DDR1-233ENST00000421124 ASIC1P78348 528 aa20.42■□□□□ 0.86
DDR1-233ENST00000421124 HERC4Q5GLZ8 1057 aaPredicted RBP20.42■□□□□ 0.86
DDR1-233ENST00000421124 CLLU1OSQ5K130 101 aa20.42■□□□□ 0.86
DDR1-233ENST00000421124 EEF1DP3Q658K8 133 aa20.42■□□□□ 0.86
DDR1-233ENST00000421124 HACE1Q8IYU2 909 aa20.42■□□□□ 0.86
DDR1-233ENST00000421124 SMG8Q8ND04 991 aaKnown RBP20.42■□□□□ 0.86
DDR1-233ENST00000421124 CASD1Q96PB1 797 aa20.42■□□□□ 0.86
DDR1-233ENST00000421124 ACO2Q99798 780 aaKnown RBP20.42■□□□□ 0.86
DDR1-233ENST00000421124 TARS2Q9BW92 718 aaKnown RBP20.42■□□□□ 0.86
DDR1-233ENST00000421124 ST6GALNAC4Q9H4F1 302 aa20.42■□□□□ 0.86
DDR1-233ENST00000421124 TNFSF13BQ9Y275 285 aa20.42■□□□□ 0.86
DDR1-233ENST00000421124 COL4A4P53420 1690 aaPredicted RBP20.42■□□□□ 0.86
DDR1-233ENST00000421124 TDRD15B5MCY1 1934 aaKnown RBP20.41■□□□□ 0.86
DDR1-233ENST00000421124 MEIS3P2A8K0S8 358 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 ITGA4P13612 1032 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 GLB1LQ6UWU2 654 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 AGMOQ6ZNB7 445 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 APBB1IPQ7Z5R6 666 aaPredicted RBP20.41■□□□□ 0.86
DDR1-233ENST00000421124 SPRED2Q7Z698 418 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 HELQQ8TDG4 1101 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 RSPH1Q8WYR4 309 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 SAMD11Q96NU1 681 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 NXF3Q9H4D5 531 aaKnown RBP20.41■□□□□ 0.86
DDR1-233ENST00000421124 MRPL44Q9H9J2 332 aaKnown RBP20.41■□□□□ 0.86
DDR1-233ENST00000421124 CERS4Q9HA82 394 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 UBN1Q9NPG3 1134 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 OLFML3Q9NRN5 406 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 MTMR10Q9NXD2 777 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 TBX20Q9UMR3 447 aa20.41■□□□□ 0.86
DDR1-233ENST00000421124 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.4■□□□□ 0.86
DDR1-233ENST00000421124 GTF2BQ00403 316 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 COASYQ13057 564 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 GRIN2CQ14957 1233 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 DCAF4L1Q3SXM0 396 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 ZPBP2Q6X784 338 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 ZNF720Q7Z2F6 126 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 GRAMD1CQ8IYS0 662 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 ARNTL2Q8WYA1 636 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 CLP1Q92989 425 aaKnown RBP20.4■□□□□ 0.86
DDR1-233ENST00000421124 PAGE5Q96GU1 130 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 C17orf80Q9BSJ5 609 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 BLZF1Q9H2G9 400 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 RSAD1Q9HA92 442 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 RWDD3Q9Y3V2 267 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 HES2Q9Y543 173 aa20.4■□□□□ 0.86
DDR1-233ENST00000421124 MRPL42Q9Y6G3 142 aaKnown RBP20.4■□□□□ 0.86
DDR1-233ENST00000421124 OFD1O75665 1012 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 ZNF202O95125 648 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 CASP1P29466 404 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 CUL4BQ13620 913 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 ZNF568Q3ZCX4 644 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 ZC2HC1CQ53FD0 456 aaPredicted RBP20.39■□□□□ 0.85
DDR1-233ENST00000421124 UNC13DQ70J99 1090 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 LRRC43Q8N309 656 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 HVCN1Q96D96 273 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 BICD1Q96G01 975 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 APOL6Q9BWW8 343 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 MRPL9Q9BYD2 267 aaKnown RBP20.39■□□□□ 0.85
DDR1-233ENST00000421124 RNF39Q9H2S5 420 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 PRDM12Q9H4Q4 367 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 PTPRHQ9HD43 1115 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 TBC1D7Q9P0N9 293 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 MTUS1Q9ULD2 1270 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 SZT2Q5T011 3432 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 CITO14578 2027 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 CHD7Q9P2D1 2997 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 TRIP11Q15643 1979 aa20.39■□□□□ 0.85
DDR1-233ENST00000421124 TOM1L1O75674 476 aa20.38■□□□□ 0.85
DDR1-233ENST00000421124 GCNT3O95395 438 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms