RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 NKD2Q969F2 451 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-203ENST00000420503 RPS6KC1Q96S38 1066 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 LXNQ9BS40 222 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 HERC2P3Q9BVR0 1158 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 EMILIN2Q9BXX0 1053 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 IRF2BPLQ9H1B7 796 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 KCNMB3Q9NPA1 279 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
LINC00339-203ENST00000420503 FBXL21Q9UKT6 434 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 CA14Q9ULX7 337 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 IPPQ9Y573 584 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 CEP250Q9BV73 2442 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 CCDC195A0A1B0GUA6 201 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 INPPL1O15357 1258 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 B4GALT5O43286 388 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 SOD2P04179 222 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 SKIP12755 728 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 NCLP19338 710 aaKnown RBP14.39□□□□□ -0.11
LINC00339-203ENST00000420503 GBP2P32456 591 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-203ENST00000420503 QARSP47897 775 aaKnown RBP14.39□□□□□ -0.11
LINC00339-203ENST00000420503 PPP2R5CQ13362 524 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 KIAA0319Q5VV43 1072 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 CENPQQ7L2Z9 268 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-203ENST00000420503 FERMT3Q86UX7 667 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 PPFIBP1Q86W92 1011 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 PALB2Q86YC2 1186 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 DTWD2Q8NBA8 298 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 ACSF2Q96CM8 615 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-203ENST00000420503 PGBD4Q96DM1 585 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 DYDC2Q96IM9 177 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 TMEM175Q9BSA9 504 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 GPR62Q9BZJ7 368 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 INO80BQ9C086 356 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-203ENST00000420503 CXCL16Q9H2A7 254 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 SLKQ9H2G2 1235 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-203ENST00000420503 NXF3Q9H4D5 531 aaKnown RBP14.39□□□□□ -0.11
LINC00339-203ENST00000420503 R4GN57 208 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 CLUHO75153 1309 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 DMXL1Q9Y485 3027 aa14.39□□□□□ -0.11
LINC00339-203ENST00000420503 CACNA1AO00555 2505 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 ARL5CA6NH57 179 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 WNT7AO00755 349 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 LRRN2O75325 713 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 DEXIO95424 95 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 ALDH2P05091 517 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 URODP06132 367 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 AKAP5P24588 427 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 YWHABP31946 246 aaKnown RBP14.38□□□□□ -0.11
LINC00339-203ENST00000420503 GLUD2P49448 558 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 CDC42EP1Q00587 391 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 DSC1Q08554 894 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 SPIRE1Q08AE8 756 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 NCAPH2Q6IBW4 605 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 MOXD1Q6UVY6 613 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 RUFY3Q7L099 469 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 SRGAP1Q7Z6B7 1085 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 TRIM22Q8IYM9 498 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 GSTCDQ8NEC7 633 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 PSPC1Q8WXF1 523 aaKnown RBP14.38□□□□□ -0.11
LINC00339-203ENST00000420503 SLC7A3Q8WY07 619 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 FAM193BQ96PV7 902 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-203ENST00000420503 PAAF1Q9BRP4 392 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 RPP25Q9BUL9 199 aaKnown RBP14.38□□□□□ -0.11
LINC00339-203ENST00000420503 ZSWIM6Q9HCJ5 1215 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 WDR6Q9NNW5 1121 aaKnown RBP14.38□□□□□ -0.11
LINC00339-203ENST00000420503 KLK14Q9P0G3 267 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 MTCL1Q9Y4B5 1905 aaKnown RBP14.38□□□□□ -0.11
LINC00339-203ENST00000420503 ZNF292O60281 2723 aa14.38□□□□□ -0.11
LINC00339-203ENST00000420503 DCNP07585 359 aaKnown RBP14.37□□□□□ -0.11
LINC00339-203ENST00000420503 ITGA4P13612 1032 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 AMHR2Q16671 573 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 XKR9Q5GH70 373 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 SPECC1Q5M775 1068 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 C15orf39Q6ZRI6 1047 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 GET4Q7L5D6 327 aaPredicted RBP14.37□□□□□ -0.11
LINC00339-203ENST00000420503 SLC44A3Q8N4M1 653 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 GPR152Q8TDT2 470 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 SMG7Q92540 1137 aaKnown RBP14.37□□□□□ -0.11
LINC00339-203ENST00000420503 PHF20Q9BVI0 1012 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 CNTNAP2Q9UHC6 1331 aa14.37□□□□□ -0.11
LINC00339-203ENST00000420503 NCOR2Q9Y618 2525 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 SPTBN2O15020 2390 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 POTEMA6NI47 508 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 TTLL13PA6NNM8 815 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 CPLX1O14810 134 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 CCNT1O60563 726 aaKnown RBP14.36□□□□□ -0.11
LINC00339-203ENST00000420503 GLUD1P00367 558 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 P4HBP07237 508 aaKnown RBP14.36□□□□□ -0.11
LINC00339-203ENST00000420503 IGFBP6P24592 240 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-203ENST00000420503 NTHL1P78549 312 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 MBTD1Q05BQ5 628 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 SCRN1Q12765 414 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 CAPSQ13938 189 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 PRSS55Q6UWB4 352 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-203ENST00000420503 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 NEK8Q86SG6 692 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 CMASQ8NFW8 434 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-203ENST00000420503 HASPINQ8TF76 798 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 FOXQ1Q9C009 403 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms