RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 MYH11P35749 1972 aa16.55■□□□□ 0.24
SEC24D-202ENST00000419654 SPATA31C2B4DYI2 1134 aa16.55■□□□□ 0.24
SEC24D-202ENST00000419654 EIF3DO15371 548 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEC24D-202ENST00000419654 SART1O43290 800 aaKnown RBP16.55■□□□□ 0.24
SEC24D-202ENST00000419654 RARRES1P49788 294 aa16.55■□□□□ 0.24
SEC24D-202ENST00000419654 MAPK7Q13164 816 aa16.55■□□□□ 0.24
SEC24D-202ENST00000419654 RNPC3Q96LT9 517 aaKnown RBP16.55■□□□□ 0.24
SEC24D-202ENST00000419654 MOV10L1Q9BXT6 1211 aaKnown RBP16.55■□□□□ 0.24
SEC24D-202ENST00000419654 TCEAL9Q9UHQ7 104 aa16.55■□□□□ 0.24
SEC24D-202ENST00000419654 UNCXA6NJT0 531 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 PSMC5P62195 406 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 DLG4P78352 724 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 LLGL1Q15334 1064 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 GNPTABQ3T906 1256 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 GLE1Q53GS7 698 aaKnown RBP16.54■□□□□ 0.24
SEC24D-202ENST00000419654 AADACL2Q6P093 401 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 PADI6Q6TGC4 694 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.54■□□□□ 0.24
SEC24D-202ENST00000419654 SYCP3Q8IZU3 236 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 IQCKQ8N0W5 287 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 DAW1Q8N136 415 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 DOCK5Q9H7D0 1870 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 TMEM110-MUSTN1A8MSY1 372 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 TTI1O43156 1089 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 DAPK3O43293 454 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 YWHABP31946 246 aaKnown RBP16.54■□□□□ 0.24
SEC24D-202ENST00000419654 JAM2P57087 298 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 STXBP2Q15833 593 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 ALS2CLQ60I27 953 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 ARHGEF26Q96DR7 871 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 PAGR1Q9BTK6 254 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 PCDHA10Q9Y5I2 948 aa16.54■□□□□ 0.24
SEC24D-202ENST00000419654 BUB1BO60566 1050 aaPredicted RBP16.53■□□□□ 0.24
SEC24D-202ENST00000419654 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
SEC24D-202ENST00000419654 ICAM3P32942 547 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 PSMC2P35998 433 aaKnown RBP16.53■□□□□ 0.24
SEC24D-202ENST00000419654 USP8P40818 1118 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 STAT1P42224 750 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 FMO5P49326 533 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 NCAPG2Q86XI2 1143 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 SLC35G2Q8TBE7 412 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 LRRC4CQ9HCJ2 640 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 RBPJLQ9UBG7 517 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 RNF14Q9UBS8 474 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 HIP1RO75146 1068 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 SLC25A27O95847 323 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 EDNRBP24530 442 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 ALDH5A1P51649 535 aaPredicted RBP16.53■□□□□ 0.24
SEC24D-202ENST00000419654 SEC24CP53992 1094 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 ZNF720Q7Z2F6 126 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 TRIM51Q9BSJ1 452 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 METTL14Q9HCE5 456 aaKnown RBP16.53■□□□□ 0.24
SEC24D-202ENST00000419654 TXNRD2Q9NNW7 524 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 ACP6Q9NPH0 428 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
SEC24D-202ENST00000419654 BACH1O14867 736 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 EIF3HO15372 352 aaKnown RBP eCLIP16.52■□□□□ 0.24
SEC24D-202ENST00000419654 EXOC3O60645 756 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 OSBPP22059 807 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 FSTL1Q12841 308 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
SEC24D-202ENST00000419654 SNAPC2Q13487 334 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 MAP1SQ66K74 1059 aaPredicted RBP16.52■□□□□ 0.24
SEC24D-202ENST00000419654 VPS36Q86VN1 386 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 SLC20A1Q8WUM9 679 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 UBLCP1Q8WVY7 318 aaPredicted RBP16.52■□□□□ 0.24
SEC24D-202ENST00000419654 SLC10A4Q96EP9 437 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 BORCS6Q96GS4 357 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 ANKEF1Q9NU02 776 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 UBE4BO95155 1302 aa16.52■□□□□ 0.24
SEC24D-202ENST00000419654 F8VZ95 297 aa16.52■□□□□ 0.23
SEC24D-202ENST00000419654 PGRMC1O00264 195 aaKnown RBP16.52■□□□□ 0.23
SEC24D-202ENST00000419654 FGGP02679 453 aa16.52■□□□□ 0.23
SEC24D-202ENST00000419654 LIG3P49916 1009 aa16.52■□□□□ 0.23
SEC24D-202ENST00000419654 STRA6Q9BX79 667 aa16.52■□□□□ 0.23
SEC24D-202ENST00000419654 JPH1Q9HDC5 661 aaPredicted RBP16.52■□□□□ 0.23
SEC24D-202ENST00000419654 AGPAT3Q9NRZ7 376 aa16.52■□□□□ 0.23
SEC24D-202ENST00000419654 SOWAHBA6NEL2 793 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 ECHS1P30084 290 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 SOX5P35711 763 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 THAP2Q9H0W7 228 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 R3HDMLQ9H3Y0 253 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 SLC9A2Q9UBY0 812 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 BZW2Q9Y6E2 419 aaKnown RBP16.51■□□□□ 0.23
SEC24D-202ENST00000419654 LRRC37A2A6NM11 1700 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 TNFRSF8P28908 595 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 HSD17B3P37058 310 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 PRKCIP41743 596 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 HS2ST1Q7LGA3 356 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 NT5DC3Q86UY8 548 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 SCFD2Q8WU76 684 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 BBXQ8WY36 941 aaPredicted RBP16.51■□□□□ 0.23
SEC24D-202ENST00000419654 TIPINQ9BVW5 301 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 INTS2Q9H0H0 1204 aaKnown RBP16.51■□□□□ 0.23
SEC24D-202ENST00000419654 TMEM59LQ9UK28 342 aa16.51■□□□□ 0.23
SEC24D-202ENST00000419654 FOXN3O00409 490 aaPredicted RBP16.5■□□□□ 0.23
SEC24D-202ENST00000419654 NDUFAB1O14561 156 aa16.5■□□□□ 0.23
SEC24D-202ENST00000419654 SP2Q02086 613 aa16.5■□□□□ 0.23
SEC24D-202ENST00000419654 SF3A3Q12874 501 aaKnown RBP eCLIP16.5■□□□□ 0.23
SEC24D-202ENST00000419654 UAP1Q16222 522 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms