RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 EVCP57679 992 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 RAC1P63000 192 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 MRPS9P82933 396 aaKnown RBP7.92□□□□□ -1.14
HMGN1-205ENST00000419378 PURAQ00577 322 aaKnown RBP7.92□□□□□ -1.14
HMGN1-205ENST00000419378 PTPN11Q06124 597 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-205ENST00000419378 TOB2Q14106 344 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-205ENST00000419378 UBE2SQ16763 222 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 KCNV1Q6PIU1 500 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 TDHQ8IZJ6 230 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 FMR1NBQ8N0W7 255 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-205ENST00000419378 AFG1LQ8WV93 481 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 BADQ92934 168 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 GAL3ST3Q96A11 431 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 MTG1Q9BT17 334 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-205ENST00000419378 UPF3BQ9BZI7 483 aaKnown RBP7.92□□□□□ -1.14
HMGN1-205ENST00000419378 CCDC86Q9H6F5 360 aaKnown RBP7.92□□□□□ -1.14
HMGN1-205ENST00000419378 TBX21Q9UL17 535 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 MKL2Q9ULH7 1088 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 CYP46A1Q9Y6A2 500 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 SPDYE3A6NKU9 549 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 hCG_1984214I3L0E3 225 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 STXBP3O00186 592 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 DLL1O00548 723 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 TLR3O15455 904 aaKnown RBP7.91□□□□□ -1.14
HMGN1-205ENST00000419378 KPNA6O60684 536 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 STAM2O75886 525 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 F13A1P00488 732 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 CD4P01730 458 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 RAG1P15918 1043 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 UBA1P22314 1058 aaKnown RBP7.91□□□□□ -1.14
HMGN1-205ENST00000419378 PDIA3P30101 505 aaKnown RBP7.91□□□□□ -1.14
HMGN1-205ENST00000419378 ADCY7P51828 1080 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 NAPAP54920 295 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 PFKFB3Q16875 520 aaPredicted RBP7.91□□□□□ -1.14
HMGN1-205ENST00000419378 GNPTABQ3T906 1256 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 DHX37Q8IY37 1157 aaKnown RBP7.91□□□□□ -1.14
HMGN1-205ENST00000419378 ZNF713Q8N859 430 aaPredicted RBP7.91□□□□□ -1.14
HMGN1-205ENST00000419378 ZSCAN1Q8NBB4 408 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 PPTC7Q8NI37 304 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 UBASH3BQ8TF42 649 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 SREK1Q8WXA9 508 aaKnown RBP7.91□□□□□ -1.14
HMGN1-205ENST00000419378 INPP4AQ96PE3 977 aaPredicted RBP7.91□□□□□ -1.14
HMGN1-205ENST00000419378 SEZ6LQ9BYH1 1024 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 BARHL2Q9NY43 387 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 UBP1Q9NZI7 540 aa7.91□□□□□ -1.14
HMGN1-205ENST00000419378 LOC100289279A0A1B0GTE1 492 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 FIBPO43427 364 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 B4GALT4O60513 344 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 GGPS1O95749 300 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 DLGAP3O95886 979 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 TIMP1P01033 207 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 TGFB3P10600 412 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 SCG2P13521 617 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 DNAJA1P31689 397 aaKnown RBP7.9□□□□□ -1.14
HMGN1-205ENST00000419378 ICAM3P32942 547 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 ANAPC15P60006 121 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 SP2Q02086 613 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 NTRK3Q16288 839 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 DGKDQ16760 1214 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 CELF3Q5SZQ8 465 aaKnown RBP7.9□□□□□ -1.14
HMGN1-205ENST00000419378 XRRA1Q6P2D8 792 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 TEX2Q8IWB9 1127 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 FBXO27Q8NI29 283 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 GPBAR1Q8TDU6 330 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 PPP1R13LQ8WUF5 828 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 PHKBQ93100 1093 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 SPATA33Q96N06 139 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 NT5C1AQ9BXI3 368 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 TRPV6Q9H1D0 765 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 ALDH8A1Q9H2A2 487 aaPredicted RBP7.9□□□□□ -1.14
HMGN1-205ENST00000419378 NCOA5Q9HCD5 579 aaKnown RBP7.9□□□□□ -1.14
HMGN1-205ENST00000419378 RIC8AQ9NPQ8 531 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 PDRG1Q9NUG6 133 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 TRMT13Q9NUP7 481 aaKnown RBP7.9□□□□□ -1.14
HMGN1-205ENST00000419378 RTEL1Q9NZ71 1219 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 PCDHA6Q9UN73 950 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 PCDHA8Q9Y5H6 950 aa7.9□□□□□ -1.14
HMGN1-205ENST00000419378 UMODL1Q5DID0 1318 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 FAM221AA4D161 298 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 SMCO2A6NFE2 343 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 PRPF3O43395 683 aaKnown RBP7.89□□□□□ -1.15
HMGN1-205ENST00000419378 EIF5BO60841 1220 aaKnown RBP7.89□□□□□ -1.15
HMGN1-205ENST00000419378 F2P00734 622 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 ZNF286BP0CG31 522 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 IFNAR1P17181 557 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 ITGB5P18084 799 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 LIG1P18858 919 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 EPHB4P54760 987 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 CCT2P78371 535 aaKnown RBP7.89□□□□□ -1.15
HMGN1-205ENST00000419378 ARID5AQ03989 594 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 FPGSQ05932 587 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 PKN1Q16512 942 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 HSDL1Q3SXM5 330 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 LRIT3Q3SXY7 679 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 FAM47CQ5HY64 1035 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 C9orf50Q5SZB4 431 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 MFSD5Q6N075 450 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 NFRKBQ6P4R8 1299 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 METTL7BQ6UX53 244 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms