RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CDH23Q9H251 3354 aa11.62□□□□□ -0.55
RFC1-203ENST00000418436 ADGRA3Q8IWK6 1321 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 A0A087X0B3 334 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 INO80B-WBP1J3KQ70 363 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 ERLIN2O94905 339 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 SSBP05455 408 aaKnown RBP eCLIP11.61□□□□□ -0.55
RFC1-203ENST00000418436 LINC00271P0C7V0 271 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 ATF7P17544 494 aaPredicted RBP11.61□□□□□ -0.55
RFC1-203ENST00000418436 TXLNAP40222 546 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 NUCB2P80303 420 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 MCM6Q14566 821 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 UBXN11Q5T124 520 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 RRAGBQ5VZM2 374 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 SHC4Q6S5L8 630 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 SPRED2Q7Z698 418 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 ZBTB8OSQ8IWT0 167 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 CMTR2Q8IYT2 770 aaKnown RBP11.61□□□□□ -0.55
RFC1-203ENST00000418436 RASSF8Q8NHQ8 419 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 CCDC51Q96ER9 411 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 IFT74Q96LB3 600 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 PRIMPOLQ96LW4 560 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 TGS1Q96RS0 853 aaKnown RBP11.61□□□□□ -0.55
RFC1-203ENST00000418436 FAM105AQ9NUU6 356 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 RNF19AQ9NV58 838 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 ODF2LQ9ULJ1 636 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 PCDHA7Q9UN72 937 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 ATP6V1DQ9Y5K8 247 aa11.61□□□□□ -0.55
RFC1-203ENST00000418436 COL4A4P53420 1690 aaPredicted RBP11.6□□□□□ -0.55
RFC1-203ENST00000418436 NPHP3-ACAD11A0A0J9YXS1 232 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 A0A1B0GUA9 196 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 SKIP12755 728 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 PLS3P13797 630 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 ARF4P18085 180 aaPredicted RBP11.6□□□□□ -0.55
RFC1-203ENST00000418436 NPTX2P47972 431 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 GATMP50440 423 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 RAB27AP51159 221 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 EFNA5P52803 228 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 PEX3P56589 373 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 KRT85P78386 507 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 NCBP1Q09161 790 aaKnown RBP11.6□□□□□ -0.55
RFC1-203ENST00000418436 GIT2Q14161 759 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 BTG3Q14201 252 aaPredicted RBP11.6□□□□□ -0.55
RFC1-203ENST00000418436 TWF2Q6IBS0 349 aaKnown RBP11.6□□□□□ -0.55
RFC1-203ENST00000418436 CCDC73Q6ZRK6 1079 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 MRPL10Q7Z7H8 261 aaKnown RBP11.6□□□□□ -0.55
RFC1-203ENST00000418436 GPBP1Q86WP2 473 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 FIBCD1Q8N539 461 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 DEPTORQ8TB45 409 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 LEO1Q8WVC0 666 aaPredicted RBP11.6□□□□□ -0.55
RFC1-203ENST00000418436 SPIRE2Q8WWL2 714 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 KCNN1Q92952 543 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 CLP1Q92989 425 aaKnown RBP11.6□□□□□ -0.55
RFC1-203ENST00000418436 CHAMP1Q96JM3 812 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 SAMD11Q96NU1 681 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 PRMT7Q9NVM4 692 aaPredicted RBP11.6□□□□□ -0.55
RFC1-203ENST00000418436 ARHGAP28Q9P2N2 729 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 KCNG1Q9UIX4 513 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
RFC1-203ENST00000418436 TRANK1O15050 2925 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 EPOPA6NHQ4 379 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 SFI1A8K8P3 1242 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 ACKR2O00590 384 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 B4GALT5O43286 388 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 HOXA2O43364 376 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 EDN1P05305 212 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 FGFR1P11362 822 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 ME1P48163 572 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 ZNF131P52739 623 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 RAD51AP2Q09MP3 1159 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 DMP1Q13316 513 aaPredicted RBP11.59□□□□□ -0.55
RFC1-203ENST00000418436 DHX8Q14562 1220 aaKnown RBP11.59□□□□□ -0.55
RFC1-203ENST00000418436 MAPK6Q16659 721 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 CLLU1OSQ5K130 101 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 RESP18Q5W5W9 173 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 NOTUMQ6P988 496 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 GPIHBP1Q8IV16 184 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 MYLIPQ8WY64 445 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 ARNTL2Q8WYA1 636 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 CPB2Q96IY4 423 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 CASD1Q96PB1 797 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 REEP2Q9BRK0 252 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 C17orf80Q9BSJ5 609 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 KIFC3Q9BVG8 833 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 PANK2Q9BZ23 570 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 TMEM117Q9H0C3 514 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 PRDM12Q9H4Q4 367 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 CERS4Q9HA82 394 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 KMT5AQ9NQR1 393 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 STXBP5LQ9Y2K9 1186 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 RBM19Q9Y4C8 960 aaKnown RBP11.59□□□□□ -0.55
RFC1-203ENST00000418436 PCDHB2Q9Y5E7 798 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 MRPL42Q9Y6G3 142 aaKnown RBP11.59□□□□□ -0.55
RFC1-203ENST00000418436 MYO9BQ13459 2157 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 PHLPP2Q6ZVD8 1323 aa11.59□□□□□ -0.55
RFC1-203ENST00000418436 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 C5orf67F2Z3F1 127 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 K7ERI5 159 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 LPXNO60711 386 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 PRKCBP05771 671 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms