RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 HSCBQ8IWL3 235 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 CCSER1Q9C0I3 900 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 CXCL16Q9H2A7 254 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 ZSCAN16Q9H4T2 348 aaPredicted RBP22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 TLR9Q9NR96 1032 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 INPP5FQ9Y2H2 1132 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 NPHP3-ACAD11A0A0J9YXS1 232 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 NT5C1B-RDH14C9J2C7 533 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 NPTXRO95502 500 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 PLCG1P19174 1290 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 MARCKSP29966 332 aaPredicted RBP22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 SLC11A1P49279 550 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 NASPP49321 788 aaPredicted RBP22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 PEX3P56589 373 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 DLX2Q07687 328 aaPredicted RBP22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 DSC1Q08554 894 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 PKP1Q13835 747 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 KCNC3Q14003 757 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 SLC39A14Q15043 492 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 PPP2R5AQ15172 486 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 ZRSR1Q15695 479 aaKnown RBP22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 LEXMQ3ZCV2 418 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 ZBTB8OSQ8IWT0 167 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 DEPTORQ8TB45 409 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 EPSTI1Q96J88 318 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 ZFP42Q96MM3 310 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 CLIC6Q96NY7 704 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 NTPCRQ9BSD7 190 aaKnown RBP22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 SPG21Q9NZD8 308 aa22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 TCF20Q9UGU0 1960 aaKnown RBP22.76■■□□□ 1.23
PKNOX1-202ENST00000418336 ARL5CA6NH57 179 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 SFI1A8K8P3 1242 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 ABLIM1O14639 778 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 GLP2RO95838 553 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 ITGA4P13612 1032 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 PPM1AP35813 382 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 ADAM15Q13444 863 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 MAPK6Q16659 721 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 SPECC1Q5M775 1068 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 VN1R2Q8NFZ6 395 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 KCNN1Q92952 543 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 GAD1Q99259 594 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 TIPINQ9BVW5 301 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 PTPRHQ9HD43 1115 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 UBN1Q9NPG3 1134 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 ZMYM2Q9UBW7 1377 aa22.75■■□□□ 1.23
PKNOX1-202ENST00000418336 ZC3H11AO75152 810 aaKnown RBP eCLIP22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 TBX10O75333 385 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 POMCP01189 267 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 AKAP5P24588 427 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 MLH1P40692 756 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 EFNA5P52803 228 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 PRPF4BQ13523 1007 aaKnown RBP22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 COLGALT2Q8IYK4 626 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 RAD54LQ92698 747 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 IGSF21Q96ID5 467 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 IFT74Q96LB3 600 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 DRC1Q96MC2 740 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 FIZ1Q96SL8 496 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 TMEM134Q9H6X4 195 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 C17orf75Q9HAS0 396 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 KCND2Q9NZV8 630 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 GIT1Q9Y2X7 761 aa22.74■■□□□ 1.23
PKNOX1-202ENST00000418336 MYH11P35749 1972 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 HIDE1A8MVS5 230 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 KCNA5P22460 613 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 UBA7P41226 1012 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 CACNB1Q02641 598 aaPredicted RBP22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 CEBPZQ03701 1054 aaKnown RBP22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 NCBP1Q09161 790 aaKnown RBP22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 RAD51AP2Q09MP3 1159 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 NAB2Q15742 525 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 LINC00301Q8NCQ3 95 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 ADAMTS19Q8TE59 1207 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 SPIRE2Q8WWL2 714 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 MARCH5Q9NX47 278 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 CLEC1BQ9P126 229 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 PHLPP2Q6ZVD8 1323 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 C5orf42Q9H799 3197 aa22.73■■□□□ 1.23
PKNOX1-202ENST00000418336 A0A087X0B3 334 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 N4BP3O15049 544 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 PLS3P13797 630 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 PROZP22891 400 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 SCNN1GP51170 649 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 MCM6Q14566 821 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 AAK1Q2M2I8 961 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 RNF168Q8IYW5 571 aaPredicted RBP22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 EFHBQ8N7U6 833 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 TMEM161BQ8NDZ6 487 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 SYMPKQ92797 1274 aaKnown RBP22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 MSLNLQ96KJ4 702 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 NECAB3Q96P71 396 aaPredicted RBP22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 TCF25Q9BQ70 676 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 TMEM175Q9BSA9 504 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 KANSL3Q9P2N6 904 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 TNFSF13BQ9Y275 285 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 NCOR1O75376 2440 aa22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 TDRD15B5MCY1 1934 aaKnown RBP22.72■■□□□ 1.23
PKNOX1-202ENST00000418336 F8W810 466 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms