RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 SYTL2Q9HCH5 934 aa10.9□□□□□ -0.66
SATB1-204ENST00000417717 C12orf4Q9NQ89 552 aa10.9□□□□□ -0.66
SATB1-204ENST00000417717 ACEP12821 1306 aa10.9□□□□□ -0.66
SATB1-204ENST00000417717 ABCA6Q8N139 1617 aa10.9□□□□□ -0.66
SATB1-204ENST00000417717 PLEKHG3A1L390 1219 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 ASAP2O43150 1006 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 KLHL41O60662 606 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 IFNA8P32881 189 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 EVA1CP58658 441 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 ITGADQ13349 1161 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 TMTC4Q5T4D3 741 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 SPOPLQ6IQ16 392 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 FAM45BPQ6NSW5 357 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 PPP4R4Q6NUP7 873 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 LRRC74BQ6ZQY2 392 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 LRRC34Q8IZ02 419 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 COG4Q9H9E3 785 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.9□□□□□ -0.67
SATB1-204ENST00000417717 CTNNAL1Q9UBT7 734 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 ATP7BP35670 1465 aa10.9□□□□□ -0.67
SATB1-204ENST00000417717 PALMO75781 387 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 ATP1A1P05023 1023 aaKnown RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 ABCB1P08183 1280 aaPredicted RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 TAB1Q15750 504 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 SLC9C2Q5TAH2 1124 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 SLF2Q8IX21 1173 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 NELFCDQ8IXH7 590 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 PHF21AQ96BD5 680 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 SUGCTQ9HAC7 445 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 GIN1Q9NXP7 522 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 DDX20Q9UHI6 824 aaKnown RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 APOL1O14791 398 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 LPXNO60711 386 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 CHEK2O96017 543 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 ALBP02768 609 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 ATF4P18848 351 aaPredicted RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 ERFP50548 548 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 LAMC2Q13753 1193 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 DYMQ7RTS9 669 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 KRT25Q7Z3Z0 450 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 RNASE11Q8TAA1 199 aaKnown RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 SCG3Q8WXD2 468 aaKnown RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 RSPH1Q8WYR4 309 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 DCUN1D5Q9BTE7 237 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 MLPHQ9BV36 600 aaPredicted RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 NPHS2Q9NP85 383 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 SMYD2Q9NRG4 433 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 A0A1W2PRG6 482 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 TRIM71Q2Q1W2 868 aaKnown RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 ZC2HC1CQ53FD0 456 aaPredicted RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 ALKBH5Q6P6C2 394 aaKnown RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 CLVS1Q8IUQ0 354 aaPredicted RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 FAM178BQ8IXR5 827 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 ASPSCR1Q9BZE9 553 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 DDX47Q9H0S4 455 aaKnown RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 GINM1Q9NU53 330 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 AURKCQ9UQB9 309 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 RAD51BO15315 384 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 ORC4O43929 436 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 NPTXRO95502 500 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 BAG3O95817 575 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 TARSP26639 723 aaKnown RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 ATP6V1E1P36543 226 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 IST1P53990 364 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.89□□□□□ -0.67
SATB1-204ENST00000417717 LBRQ14739 615 aaKnown RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 ZNF658Q5TYW1 1059 aaPredicted RBP10.89□□□□□ -0.67
SATB1-204ENST00000417717 MB21D1Q8N884 522 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 CNBD1Q8NA66 436 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 MCUQ8NE86 351 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 POMGNT1Q8WZA1 660 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 P2RX5Q93086 422 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 KIF17Q9P2E2 1029 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 MAP3K2Q9Y2U5 619 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 DIP2BQ9P265 1576 aa10.89□□□□□ -0.67
SATB1-204ENST00000417717 A0A087WXM4 84 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 PJA2O43164 708 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 TATP17735 454 aaPredicted RBP10.88□□□□□ -0.67
SATB1-204ENST00000417717 BLMHQ13867 455 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 PRKG1Q13976 671 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 TAF12Q16514 161 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 PDCD4Q53EL6 469 aaKnown RBP10.88□□□□□ -0.67
SATB1-204ENST00000417717 LMBRD2Q68DH5 695 aaPredicted RBP10.88□□□□□ -0.67
SATB1-204ENST00000417717 AGAP11Q8TF27 550 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 COX4I2Q96KJ9 171 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 TRABDQ9H4I3 376 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 STK17AQ9UEE5 414 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 SERPINB13Q9UIV8 391 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 BTBD3Q9Y2F9 522 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 CLIC4Q9Y696 253 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 USP19O94966 1318 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 ATXN2Q99700 1313 aaKnown RBP10.88□□□□□ -0.67
SATB1-204ENST00000417717 TMEM120BA0PK00 339 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 CCDC162PA2VCL2 907 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 PFDN6O15212 129 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 TOMM70O94826 608 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 SCNN1BP51168 640 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 EPS8Q12929 822 aa10.88□□□□□ -0.67
SATB1-204ENST00000417717 KIF19Q2TAC6 998 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms