RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PCDHA12Q9UN75 941 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 USTQ9Y2C2 406 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 IPPQ9Y573 584 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 INPPL1O15357 1258 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 LARGE1O95461 756 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 AXLP30530 894 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 ANAPC15P60006 121 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 POU5F1BQ06416 359 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 PCBP1Q15365 356 aaKnown RBP eCLIP16.5■□□□□ 0.23
RPS28-201ENST00000417088 AMHR2Q16671 573 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 IFNLR1Q8IU57 520 aaPredicted RBP16.5■□□□□ 0.23
RPS28-201ENST00000417088 COLGALT2Q8IYK4 626 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 PLCD3Q8N3E9 789 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 ASAP3Q8TDY4 903 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 CCDC51Q96ER9 411 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 CPB2Q96IY4 423 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 GAD1Q99259 594 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 BRMS1Q9HCU9 246 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 MRPL17Q9NRX2 175 aaKnown RBP16.5■□□□□ 0.23
RPS28-201ENST00000417088 MARCH5Q9NX47 278 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 HES2Q9Y543 173 aa16.5■□□□□ 0.23
RPS28-201ENST00000417088 ARL5CA6NH57 179 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 INO80B-WBP1J3KQ70 363 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 SOD2P04179 222 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 ARL2P36404 184 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 OR1G1P47890 313 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 MBTD1Q05BQ5 628 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 CAPSQ13938 189 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 TFDP1Q14186 410 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 CALCRLQ16602 461 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 ME3Q16798 604 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 NOTUMQ6P988 496 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 TAS1R1Q7RTX1 841 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 HERC2P3Q9BVR0 1158 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 CSRNP2Q9H175 543 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 TTC12Q9H892 705 aaPredicted RBP16.49■□□□□ 0.23
RPS28-201ENST00000417088 ANKEF1Q9NU02 776 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 MIOSQ9NXC5 875 aa16.49■□□□□ 0.23
RPS28-201ENST00000417088 PRG3Q9Y2Y8 225 aaPredicted RBP16.49■□□□□ 0.23
RPS28-201ENST00000417088 ARID2Q68CP9 1835 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 BTBD18B2RXH4 712 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 WNT7AO00755 349 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 C2CD2LO14523 706 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 DGAT1O75907 488 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 EFEMP2O95967 443 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 URODP06132 367 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 ARF4P18085 180 aaPredicted RBP16.48■□□□□ 0.23
RPS28-201ENST00000417088 GLRA2P23416 452 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 MLH1P40692 756 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 NUBP1P53384 320 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 DSC1Q08554 894 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 NCBP1Q09161 790 aaKnown RBP16.48■□□□□ 0.23
RPS28-201ENST00000417088 RNF168Q8IYW5 571 aaPredicted RBP16.48■□□□□ 0.23
RPS28-201ENST00000417088 NSUN7Q8NE18 718 aaKnown RBP16.48■□□□□ 0.23
RPS28-201ENST00000417088 GTF3C6Q969F1 213 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 ZFP42Q96MM3 310 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 RPS6KC1Q96S38 1066 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 FAM86C1Q9NVL1 165 aa16.48■□□□□ 0.23
RPS28-201ENST00000417088 A0A087WWV3 80 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 F8W810 466 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 TEX28O15482 410 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 B4GALT5O43286 388 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 TXKP42681 527 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 RARRES1P49788 294 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 SCNN1GP51170 649 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 KIAA0319Q5VV43 1072 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 C15orf39Q6ZRI6 1047 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 CCDC149Q6ZUS6 474 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 OTOP3Q7RTS5 596 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 DIS3L2Q8IYB7 885 aaKnown RBP16.47■□□□□ 0.23
RPS28-201ENST00000417088 PIGOQ8TEQ8 1089 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 ACSF2Q96CM8 615 aaPredicted RBP16.47■□□□□ 0.23
RPS28-201ENST00000417088 MTMR9Q96QG7 549 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 APOL6Q9BWW8 343 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 SSX2IPQ9Y2D8 614 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 GIT1Q9Y2X7 761 aa16.47■□□□□ 0.23
RPS28-201ENST00000417088 ZFHX2Q9C0A1 2572 aaPredicted RBP16.47■□□□□ 0.23
RPS28-201ENST00000417088 H0Y858 1186 aa16.46■□□□□ 0.23
RPS28-201ENST00000417088 GALR2O43603 387 aaPredicted RBP16.46■□□□□ 0.23
RPS28-201ENST00000417088 NEMFO60524 1076 aa16.46■□□□□ 0.23
RPS28-201ENST00000417088 JAK2O60674 1132 aa16.46■□□□□ 0.23
RPS28-201ENST00000417088 TMEM105Q8N8V8 129 aa16.46■□□□□ 0.23
RPS28-201ENST00000417088 GSTCDQ8NEC7 633 aa16.46■□□□□ 0.23
RPS28-201ENST00000417088 CMASQ8NFW8 434 aaPredicted RBP16.46■□□□□ 0.23
RPS28-201ENST00000417088 NFKBIZQ9BYH8 718 aa16.46■□□□□ 0.23
RPS28-201ENST00000417088 IRF2BPLQ9H1B7 796 aa16.46■□□□□ 0.23
RPS28-201ENST00000417088 NXF3Q9H4D5 531 aaKnown RBP16.46■□□□□ 0.23
RPS28-201ENST00000417088 RXFP1Q9HBX9 757 aa16.46■□□□□ 0.23
RPS28-201ENST00000417088 MAN1C1Q9NR34 630 aa16.46■□□□□ 0.23
RPS28-201ENST00000417088 DENND4AQ7Z401 1863 aa16.46■□□□□ 0.22
RPS28-201ENST00000417088 USP34Q70CQ2 3546 aa16.45■□□□□ 0.22
RPS28-201ENST00000417088 ADH1AP07327 375 aa16.45■□□□□ 0.22
RPS28-201ENST00000417088 XRCC6P12956 609 aaKnown RBP eCLIP16.45■□□□□ 0.22
RPS28-201ENST00000417088 AKAP5P24588 427 aa16.45■□□□□ 0.22
RPS28-201ENST00000417088 GLUD2P49448 558 aa16.45■□□□□ 0.22
RPS28-201ENST00000417088 FOSBP53539 338 aa16.45■□□□□ 0.22
RPS28-201ENST00000417088 DSG1Q02413 1049 aa16.45■□□□□ 0.22
RPS28-201ENST00000417088 CDR2LQ86X02 465 aaPredicted RBP16.45■□□□□ 0.22
RPS28-201ENST00000417088 ATOH1Q92858 354 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms