RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 LPXNO60711 386 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 ITGA4P13612 1032 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 LAG3P18627 525 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 ZNF131P52739 623 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 GPM6BQ13491 265 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 GIT2Q14161 759 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 PTPROQ16827 1216 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 CSPP1Q1MSJ5 1256 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 LONRF3Q496Y0 759 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 AGMOQ6ZNB7 445 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 APBB1IPQ7Z5R6 666 aaPredicted RBP19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 PDILTQ8N807 584 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 SMG8Q8ND04 991 aaKnown RBP19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 URGCPQ8TCY9 931 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 LEO1Q8WVC0 666 aaPredicted RBP19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 P2RX5Q93086 422 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 SPATA32Q96LK8 384 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 PANK2Q9BZ23 570 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 SCAND2PQ9GZW5 306 aaPredicted RBP19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 PDZD7Q9H5P4 517 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 RSAD1Q9HA92 442 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 FAM13BQ9NYF5 915 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 PCDHB12Q9Y5F1 795 aa19.82■□□□□ 0.76
SEMA3B-201ENST00000416295 COL4A4P53420 1690 aaPredicted RBP19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 A0A087X0B3 334 aa19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 MEIS3P2A8K0S8 358 aa19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 NPTXRO95502 500 aa19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 STRN3Q13033 797 aa19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 NOMO2Q5JPE7 1267 aa19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 ATF7IP2Q5U623 682 aa19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 CDR2LQ86X02 465 aaPredicted RBP19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 MYCT1Q8N699 235 aa19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 MRPL4Q9BYD3 311 aaKnown RBP19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 MTCH2Q9Y6C9 303 aa19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 FNDC1Q4ZHG4 1894 aaPredicted RBP19.81■□□□□ 0.76
SEMA3B-201ENST00000416295 TTC28Q96AY4 2481 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 CARNS1A5YM72 827 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 TTLL13PA6NNM8 815 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 OFD1O75665 1012 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 ABCD1P33897 745 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 ANP32AP39687 249 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 NCKAP1LP55160 1127 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 CCDC85BQ15834 202 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 DCAF4L1Q3SXM0 396 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 RESP18Q5W5W9 173 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 LRRC55Q6ZSA7 311 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 IQUBQ8NA54 791 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 COLGALT1Q8NBJ5 622 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 TMEM161BQ8NDZ6 487 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 DDX12PQ92771 950 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 KCNN1Q92952 543 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 PYM1Q9BRP8 204 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 LRRC27Q9C0I9 530 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 LMAN2LQ9H0V9 348 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 NXF3Q9H4D5 531 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 ZHX3Q9H4I2 956 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 CWH43Q9H720 699 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 KANSL3Q9P2N6 904 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 INPP5FQ9Y2H2 1132 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 VCANP13611 3396 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 ZMYM2Q9UBW7 1377 aa19.8■□□□□ 0.76
SEMA3B-201ENST00000416295 NLRC5Q86WI3 1866 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 TRAK2O60296 914 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 EDN1P05305 212 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 MAPTP10636 758 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 RNASELQ05823 741 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 E2F4Q16254 413 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 NT5DC1Q5TFE4 455 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 DYMQ7RTS9 669 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 TAS1R3Q7RTX0 852 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 MRPL38Q96DV4 380 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 ZNF558Q96NG5 402 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 TNMDQ9H2S6 317 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 TBC1D13Q9NVG8 400 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 HCSTQ9UBK5 93 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 TNFSF13BQ9Y275 285 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 GIT1Q9Y2X7 761 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 HES2Q9Y543 173 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 TRANK1O15050 2925 aa19.79■□□□□ 0.76
SEMA3B-201ENST00000416295 MYMKA6NI61 221 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 K7ENM7 598 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 PPM1AP35813 382 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 MRPS5P82675 430 aaKnown RBP19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 HAUS6Q7Z4H7 955 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 FAM178BQ8IXR5 827 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 MICALL1Q8N3F8 863 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 KLHL23Q8NBE8 558 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 DHX58Q96C10 678 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 ACO2Q99798 780 aaKnown RBP19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 APOL6Q9BWW8 343 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 RNF39Q9H2S5 420 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 MAGEF1Q9HAY2 307 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 PRDM6Q9NQX0 595 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 SEL1LQ9UBV2 794 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 PLAGL2Q9UPG8 496 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 USP20Q9Y2K6 914 aa19.78■□□□□ 0.76
SEMA3B-201ENST00000416295 ARL5CA6NH57 179 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 INPPL1O15357 1258 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 POLR2DO15514 142 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms