RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 CCDC181Q5TID7 509 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 OLFML2BQ68BL8 750 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 CCNI2Q6ZMN8 369 aaPredicted RBP12.58□□□□□ -0.4
RFFL-205ENST00000415395 MAEAQ7L5Y9 396 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 TMEM161BQ8NDZ6 487 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 NPLOC4Q8TAT6 608 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 FAM76AQ8TAV0 307 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 ATP8B4Q8TF62 1192 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 GLG1Q92896 1179 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 SH2D3AQ9BRG2 576 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 IFIH1Q9BYX4 1025 aaKnown RBP12.58□□□□□ -0.4
RFFL-205ENST00000415395 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 DMAC2Q9NW81 257 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 TMEM51Q9NW97 253 aa12.58□□□□□ -0.4
RFFL-205ENST00000415395 GOLGA6BA6NDN3 693 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 RGS2P41220 211 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 KCNA1Q09470 495 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 PPFIA1Q13136 1202 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 NOGQ13253 232 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 ACVR2BQ13705 512 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
RFFL-205ENST00000415395 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 EEF2KMTQ96G04 330 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 CAPZA3Q96KX2 299 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 RUFY1Q96T51 708 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 GPRC5CQ9NQ84 441 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 KMT5AQ9NQR1 393 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 TRIM10Q9UDY6 481 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 ARMCX3Q9UH62 379 aaPredicted RBP12.57□□□□□ -0.4
RFFL-205ENST00000415395 SNX12Q9UMY4 172 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 PLAGL2Q9UPG8 496 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.57□□□□□ -0.4
RFFL-205ENST00000415395 MAPK13O15264 365 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 HBP1O60381 514 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 N4BP1O75113 896 aaKnown RBP12.57□□□□□ -0.4
RFFL-205ENST00000415395 MAFO75444 373 aaPredicted RBP12.57□□□□□ -0.4
RFFL-205ENST00000415395 LCA5LO95447 670 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 ABL1P00519 1130 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 HOXD8P13378 290 aaPredicted RBP12.57□□□□□ -0.4
RFFL-205ENST00000415395 PSMC2P35998 433 aaKnown RBP12.57□□□□□ -0.4
RFFL-205ENST00000415395 ARL2P36404 184 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 NAMPTP43490 491 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 EPHB4P54760 987 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 APBA1Q02410 837 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 CRHR2Q13324 411 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 EMBQ6PCB8 327 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
RFFL-205ENST00000415395 MAP4K3Q8IVH8 894 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 RNF10Q8N5U6 811 aaKnown RBP12.57□□□□□ -0.4
RFFL-205ENST00000415395 TCP11Q8WWU5 503 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 COPS5Q92905 334 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 APBA2Q99767 749 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 SELENOOQ9BVL4 669 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 POLR3FQ9H1D9 316 aaPredicted RBP12.57□□□□□ -0.4
RFFL-205ENST00000415395 SUGCTQ9HAC7 445 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 ERAP1Q9NZ08 941 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 HDAC6Q9UBN7 1215 aa12.57□□□□□ -0.4
RFFL-205ENST00000415395 CASP8AP2Q9UKL3 1982 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 CCDC169A6NNP5 214 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 SLC16A4O15374 487 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 AKR1B10O60218 316 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 TNFRSF8P28908 595 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 ADCYAP1R1P41586 468 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 MAGEA9P43362 315 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 NNTQ13423 1086 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 PLCB4Q15147 1175 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 ALS2CLQ60I27 953 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 AGPAT5Q9NUQ2 364 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 ARHGAP28Q9P2N2 729 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 TBX20Q9UMR3 447 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 FRMD4BQ9Y2L6 1034 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 PCDHA13Q9Y5I0 950 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 COL1A2P08123 1366 aa12.56□□□□□ -0.4
RFFL-205ENST00000415395 IGKV6-21A0A0C4DH24 114 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 SSU72P8A0A1W2PR75 194 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 MACROD2A1Z1Q3 448 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 DENND3A2RUS2 1198 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 GOLGA6CA6NDK9 693 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 TNPO2O14787 897 aaKnown RBP12.55□□□□□ -0.4
RFFL-205ENST00000415395 PHACTR2O75167 634 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 AKAP3O75969 853 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 SYF2O95926 243 aaKnown RBP12.55□□□□□ -0.4
RFFL-205ENST00000415395 GOLGA6DP0CG33 693 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 XRCC5P13010 732 aaKnown RBP12.55□□□□□ -0.4
RFFL-205ENST00000415395 KIF11P52732 1056 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 DNAJC21Q5F1R6 531 aaKnown RBP12.55□□□□□ -0.4
RFFL-205ENST00000415395 IER5Q5VY09 327 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 BSNDQ8WZ55 320 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 NOX5Q96PH1 765 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 GOLGA6AQ9NYA3 693 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 GJD2Q9UKL4 321 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 SIK3Q9Y2K2 1263 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 ZSWIM8A7E2V4 1837 aa12.55□□□□□ -0.4
RFFL-205ENST00000415395 RASSF10A6NK89 507 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 CLIC2O15247 247 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 PJA2O43164 708 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 HSF2BPO75031 334 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 IGHA2P01877 340 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms