RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 L1TD1Q5T7N2 865 aaKnown RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 TWF2Q6IBS0 349 aaKnown RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 APBB1IPQ7Z5R6 666 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 GRAMD1CQ8IYS0 662 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 TMEM174Q8WUU8 243 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 BLZF1Q9H2G9 400 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 PDZD7Q9H5P4 517 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 TMEM206Q9H813 350 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 MRPL44Q9H9J2 332 aaKnown RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 COLQQ9Y215 455 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 STYXL1Q9Y6J8 313 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-207ENST00000415107 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-207ENST00000415107 ZBBXA8MT70 800 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 B4GALT5O43286 388 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 MBD3O95983 291 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-207ENST00000415107 PTMSP20962 102 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 NMT1P30419 496 aaKnown RBP13.08□□□□□ -0.32
ATG4B-207ENST00000415107 SNRPFP62306 86 aaKnown RBP13.08□□□□□ -0.32
ATG4B-207ENST00000415107 DEFB103AP81534 67 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 POU5F1Q01860 360 aaKnown RBP13.08□□□□□ -0.32
ATG4B-207ENST00000415107 MCL1Q07820 350 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 HERC6Q8IVU3 1022 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 ZNF507Q8TCN5 953 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-207ENST00000415107 ZNF689Q96CS4 500 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-207ENST00000415107 ADPGKQ9BRR6 497 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 ZHX3Q9H4I2 956 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 EXOC1Q9NV70 894 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 EXOC7Q9UPT5 735 aa13.08□□□□□ -0.32
ATG4B-207ENST00000415107 TMEM265A0A087WTH1 108 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 DGKIO75912 1065 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 KIF20AO95235 890 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 SMC2O95347 1197 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 GCNT3O95395 438 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 MCF2P10911 925 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 CASP1P29466 404 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 MCM4P33991 863 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 CASP5P51878 434 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 MPZL3Q6UWV2 235 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 HACE1Q8IYU2 909 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 MYOCDQ8IZQ8 938 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 KIAA0895Q8NCT3 520 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 PGBD4Q96DM1 585 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 UBN1Q9NPG3 1134 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 CGNQ9P2M7 1197 aaKnown RBP13.07□□□□□ -0.32
ATG4B-207ENST00000415107 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 PCDHA11Q9Y5I1 949 aa13.07□□□□□ -0.32
ATG4B-207ENST00000415107 HNRNPDLO14979 420 aaKnown RBP13.06□□□□□ -0.32
ATG4B-207ENST00000415107 KIAA0391O15091 583 aaKnown RBP13.06□□□□□ -0.32
ATG4B-207ENST00000415107 MYBP10242 640 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 STK4Q13043 487 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 PNOCQ13519 176 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 RAB30Q15771 203 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 KYAT1Q16773 422 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 ZC2HC1CQ53FD0 456 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-207ENST00000415107 SLFN12LQ6IEE8 588 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 GPR153Q6NV75 609 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 CMTR2Q8IYT2 770 aaKnown RBP13.06□□□□□ -0.32
ATG4B-207ENST00000415107 TRIML1Q8N9V2 468 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 SMG8Q8ND04 991 aaKnown RBP13.06□□□□□ -0.32
ATG4B-207ENST00000415107 GPT2Q8TD30 523 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 ACCSQ96QU6 501 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 RAD9AQ99638 391 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 TARS2Q9BW92 718 aaKnown RBP13.06□□□□□ -0.32
ATG4B-207ENST00000415107 EIF2AQ9BY44 585 aaKnown RBP13.06□□□□□ -0.32
ATG4B-207ENST00000415107 FGFBP2Q9BYJ0 223 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 CDT1Q9H211 546 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 CLSTN2Q9H4D0 955 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 GIT1Q9Y2X7 761 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 IPPQ9Y573 584 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 PCDHB7Q9Y5E2 793 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 PCDHA5Q9Y5H7 936 aa13.06□□□□□ -0.32
ATG4B-207ENST00000415107 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 CLDN3O15551 220 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 FAM189A1O60320 539 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 GARTP22102 1010 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 PPP1R2P41236 205 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 GRM5P41594 1212 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 LIG4P49917 911 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
ATG4B-207ENST00000415107 ZNF568Q3ZCX4 644 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 EEF1DP3Q658K8 133 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 SLC39A4Q6P5W5 647 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 FOXR2Q6PJQ5 311 aa13.05□□□□□ -0.32
ATG4B-207ENST00000415107 RBM43Q6ZSC3 357 aaKnown RBP13.05□□□□□ -0.32
ATG4B-207ENST00000415107 C12orf56Q8IXR9 622 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms